| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2589 |
|---|
| Symbol | |
|---|
| ID | 8650132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2845111 |
|---|
| End bp | 2845965 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | LicD family protein |
|---|
| Protein accession | YP_003327161 |
|---|
| Protein GI | 269957372 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCAAGG AGCCTGTCAC ACCCGCCGAG CTGCGCGAGC TGCAGCTCGC GATGCTCGAG
TTCGTCGACG GCGTGTGCCG TTCGGAGGGC ATCGAGTACA CGCTGGCGGG CGGGTCGCTC
CTCGGTGCCG TCCGTCACGG CGGGTACATC CCGTGGGACG ACGACATCGA CGTCGAGCTC
ACCCGGCCGC ACTACGAGCG GCTCATGGCC CGGCTGCGCA CGGAGCTGCC CGAGCACGTC
GCGCTCCTGC ACTACTCCGA GCGGCCCACG TTCCTGCCGT GGGCCAAGCT GTACGACACC
CGCACCGGGT ACACGTCGCA CATCGACACC CAGCACCTGG GCACCGGGGT GTACATCGAC
ATCTTCCCGA TGGACGTGGT GCCCGACGAC GACGCCGAGC TCGCCGAGCA CCGTGCCGGG
TTCTACCGCC GGTTCTCGTG GCTTGCCGCG TCCGCGACCC ACGGCCTGGC GTACGCGAGC
GCGTCACGTT GGCGATACTT CCTCGGCAAG CTGGTGCTGT GGCTGCCCCG GCACCTGCGC
TACCGGGGGC AGGGGCGCGA GCTCGCCGCG ACCCTCGACA CGTACCTGAG GCGTTACGAG
CACTCGGCCC ACGGCCAGAT CGGGTTCTTC CACCGCGCGT TCCCCGACGC GATCTACCCG
CGTGCGATGT GGGACTCCTA CGAGGACGTC CCGTTCGAGC ACCTGACGGC ACGCAAGCTC
GTGGACCACG ACGGGTACTT GACCCGCCAC TACGGCGACT ACATGACGCC GCCGCCCGCG
CGGGAGCAGC AGGAAGCCCA CGGCTTCTAC CGCTGGTTCT GGAAGCCGGG GATGCGGCCC
CGCGTCAGCG ACTGA
|
|---|
| Protein sequence | MRKEPVTPAE LRELQLAMLE FVDGVCRSEG IEYTLAGGSL LGAVRHGGYI PWDDDIDVEL
TRPHYERLMA RLRTELPEHV ALLHYSERPT FLPWAKLYDT RTGYTSHIDT QHLGTGVYID
IFPMDVVPDD DAELAEHRAG FYRRFSWLAA SATHGLAYAS ASRWRYFLGK LVLWLPRHLR
YRGQGRELAA TLDTYLRRYE HSAHGQIGFF HRAFPDAIYP RAMWDSYEDV PFEHLTARKL
VDHDGYLTRH YGDYMTPPPA REQQEAHGFY RWFWKPGMRP RVSD
|
|---|
| |