Gene Xcel_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_2560 
Symbol 
ID8650103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand+ 
Start bp2802031 
End bp2802648 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content72% 
IMG OID 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003327133 
Protein GI269957344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.17044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATATCC GAGCACTGAA GATCGAGGGC GCGTGGGAGC TCACGCCCCG CCAGTTCGGC 
GACGACCGGG GGGTGTTCCT CGAGTGGTTC AAGGGTGACG CGTTCGCCGA GGCGGTCGGG 
CACGGGATCG ACCTGCGCCA GGCCAACCTC TCCGTCTCGG CCGCCGGGGT GCTGCGCGGC 
GTCCACTTCG CAGACGTCCC GCCCAGCCAG GCGAAGTACG TCACCTGCGT CAAGGGCGCG 
GTGCTCGACG TCGTCGTCGA CATCCGGGTG GGCTCGCCGA CCTACGGCCA GTGGGACTCG 
GTGCTGCTCG ACGACGTCGA CCGGCGCGCG ATCTACCTCT CGGAAGGGCT CGGCCACGCG 
TTCTGCTCGC TCGAGGACGG CTCCACGGTC ACCTACCTGT GCTCGGCGCC GTACGCGCCC 
GGCCGTGAGC ACGGCATCCA CCCGCTCGAC CCGGAGATTG GCATCGTGTG GCCGACGACA 
GGGCGGGACG GCTCGCCGCT CGCACCGCTG CTGAGCGACA AGGACGCCGC CGCCCCGACG 
CTGGCCGAGG CCCGCGAGCA GGGCCTGCTG CCCACGTGGG ACGCCGTGCA GGAGTTCCGG 
GCGTCGCTGC GCGGCTGA
 
Protein sequence
MDIRALKIEG AWELTPRQFG DDRGVFLEWF KGDAFAEAVG HGIDLRQANL SVSAAGVLRG 
VHFADVPPSQ AKYVTCVKGA VLDVVVDIRV GSPTYGQWDS VLLDDVDRRA IYLSEGLGHA 
FCSLEDGSTV TYLCSAPYAP GREHGIHPLD PEIGIVWPTT GRDGSPLAPL LSDKDAAAPT 
LAEAREQGLL PTWDAVQEFR ASLRG