Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_2548 |
Symbol | |
ID | 8650091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 2784976 |
End bp | 2788380 |
Gene Length | 3405 bp |
Protein Length | 1134 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | glycosyltransferase-like protein |
Protein accession | YP_003327121 |
Protein GI | 269957332 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.784174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATGA GCGCTCCCGA CATCACTCAG CTTCGCGGCG GCCTGCCGGG CGAGAAGCCC GGCCCTGACG GTGCCGCCCT CGACGTCGTG CACGCCCTCA CGGGGGCGAT CCCGCAGGTC GTGACGGTGA CCGCCGTCGT GGTCACGCGC GGGCACAGTC CCTTCCTCGC GACCACCCTG GCCGCCCTCG GCGCGCAGGA CCGTCCCGTC GACGACGTCG TGATCGTGGA CGTCGACGCG ACGCGGACCG CCAGCGCGTC GCTCGGCCTG CGTCTCGACG GGCCCGACGG CGCCCCGACC CCGGACGGCG CCGGCGCGCG CTTCGTGCCC GCCGCCGGTG CGCGCAGCTT TGGCGAGGCG GTCGACCTCG CGATCGAGGC CGGGGCGTGC GGCCCGCACG GCTGGATGTG GCTCCTGCAC GACGACGCGG CCCCCGACCC CGGGGCGCTG TCCGCGCTGC TGCGCGCCGT CGAGCACACC AAGGCCGTCG CGATCGCCGG GTGCAAGCAG CGGCGCTGGC CCGTGGCCGA CGACGGGACG CCGCTCACGC CGGGCGAGGG CGGGCAGGTG CTCGTCGAGG TCGGGCACAC CGTCTCGCCC GTCGGCCGGC GGATGACGGG CATCGACGAC ACCGAGATCG ACCAGGGCCA GCACGACGCC AAGGAGGACG TGCTCGCCGT CGGGCTCGCG GGGGCGGTGG TGCGCACCGA CGTCTGGCAG GAGCTCGGCG GCACCGATCC CGAGTACGGC GCGTTCGGCG ACGGACTCGA CCTGTGCCGC CGCGCCCGCC GCGCCGGGCA CCGCGTCGTC GTCGTCCCCG AGGCCGTCGT CCACCACGCG CAGGCCTCGC TGCTCGGGCT GCGCGCCGGG CGCGCGCCCG ACGAGGCCAC GTCCTACGGG CTCCGCCGGC GGTCCCAGCT CCACCACCGG CTCGTGCACG TCCCGGCACC GCTGCTGATA CCGGCGATCC TGGGCATGGT GCTGTGGGCG CCCGTCGCGG CCATGTACCG GCTGGCGCTC AAGCACCCGG GGGAGGCCCG CGACGAGATC CTCGCGGCGC TGTGGAACGC GCTGCGCGTC GGCCCGCTGC TGCGCGCCCG ACGCAACGCG ACGCGCACCG CGATGCTCCC GCGCCGCGTG CTGCACCCGC TGCTCGCGAG CTGGCGGCAG GTGTATCGCG AGCGCCGCGA CGTGCGGCTC GCGCGCGCCG AGGCGAACCG CACCCGGTTC GCGCCGACCG AGCTGGAACG CGTCGAGCTG CGCAAGCTCG CCCTGCGCCG TCGTGCCGGG CTGACGGTCA CCGTGCTGGC CACGGGCGGC CTCGCGCTGG CGGTCTTCGG GGGCTGGCAG GGCGTGCTGG CGCAGGGCGG TCGCGTGGTG GGTGGCGCGC TGCTGCCTGC GCCCGGCACG GTGGGCGATG TCTGGAGCGC GGCGACGTCG GCGTGGGTCT CGGCGGGCCT GGGTGTCCGG GCGCCCGCCG ACCCGGTGCT CGTCCCGCTG ACCGTGCTGA CCTGGCTGGC CGGCGGTTCC CTCCAGACGG CGATGAACGT GCTGATGGTG GCCGCGCTGC CGCTCGCTGC GCTCGGCGCC TGGTTCGCCA CCGGCTGCGT GACCCGTTCG ACGTGGGCGC GGACCGTGGG TGCGCTCGCC TGGGCGGGGT CGCCGGCCTT CCTCGTGACG CTCCAGACCG GCCGGTACGG TGCGCTGCTC GCGCATCTCG CGCTGCCGTG GGCGGCGCTG GCGCTCGTCC GCGCGGTCGG GGCGCAGGCC CGTGACGAGG TCGAGGTGCC CGAGTCCGCC AACCCCGATC CCGAGGTGCG GGTGCGTCAG GTCTGGCGCT CGGACCGGTT GCGTCGCGGG TCGCTCGGTG CGGCCGCTGC CGCCGGGCTC CTGCTCGCGG TGGCCGTCTC CGCCGCGCCG GTGCTGCTCC TGGTCGCGGT GGCCGTCGTC GCCGTCGGCA TGGTCGCCGC TCCGCGTGAT CGCAAGAACC TGCTGCTCGC GCTCGTGCCG TCCGCCGTCG TCGCGGCCCC GTTCTGGATG TACGTGGCCC GCACCTGGAC GGACGGCGGC TGGCGGCTGC TGCTCGCGGA GCCGGGCGCC GTCGCACGCA CGGGGGAGGC GCCGGCCGGC TGGCAGCTCC TGCTCGGCCA CGCCCAGGTG CCGCAGGCCT GGTTCGGGGT GGGTGAGGGT GCCCACCCGC TGCTGGTAGC CCTTGCCGAC GCCGCACCCT GGGTGTTCGG CGGGCTGGTG GTGGTGCTCG CGCTGGCGGC CCTGGCCCGC CCGCGCGTCA TCGGCGGGGT CCGCACGGCC TGGGTGGTCG CCGCGGCCGG GCTGGTCGCG GGGATGCTCG CCGTCGGGCA GGGCGCCTGG GCCGGGCCCG GCGCGAGCGT GGTGCTGCTC GGGCTGGGTG GTGCCGCGCT GCTCGGCGCC CCCGTCGCAC GGGAGGCCCT CACCGACGCG GACCGCACCG GCTGGGTCGC GTTGCGGCGC GGTGTCGGGC TGCTGGCCGT CACGGTGCTG GTGCTGCTGC CCGGTGCCGG CGCGCTCTCG TGGACCCTCG ACCAGGCGGA CGGCCTGCGG CTCGGAGACC TGCGGGCCAC CGGTGAGGCC GTGGTGCCGG CCGTCGGCCG GCAGATGCAG GCCGCCCCGC GCGCGGCCCG CGTGCTCCAG CTCGGGCACG ACGACGGTGC GTCGGACGGC GGCGGTACGG CGGACGGTGG CGGTGCGGCG GCCGACGGCG TGCTCGGCTA CTCGCTGCTG CGCGCCGACG GGACCGCGCT CATCGACTCC TCCGTGGTGG CCCGCGCCCA GGACGACGCG ACCCCCGACC CGGTGGACAC CCTGGTGGCG GCCCTCGCCG TCGGGCAGGC CCCAGGCCTC GCGGCCGGTC TCGCCGACCT CGGCATCGGT GCCGTGCAGG TGCGCGCCGA CGCCGATGCC GACCTCGTGA CCACGCTCGA CATGGTGCCG GGCCTCGAAC GCGTCACGGA GGGCGACGGG ACGCTGCTGT GGCGCGTCGG CGGCGACCCC GAGCCACCGC CCGGGTGGGC GCGGCTCGTC GACGTGCCGG CGGAGGCCGG CACCCGTCCC GCCACGCTCG CCGTGCTGCC GTCCGACGGC CACCGCGTGA CGACGAACGT GCCGCTCGCC GACGCGCCAG ACCAGGAGCG CACGCTCGTG CTGGCCTCCG CCGCCGACCG CGGCTGGCGG GCCACGCTCG ACGGGCGACG GCTCCCGGTG GTCGAGGCGG ACGGGCTGCA GGCCTTCGCG GTGCCGCCCG CGGGGGGCAC CCTGCGGGTC GAGCACGTGA GCGCCCGGCA GCCGCTGTGG TTCGGGCTCG GTGGCGGCGT CTTGCTCGTG TACGTGTTGC TGGCCCTGCC CGTCGGGCGC CGGCGGGGGA GGTGA
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Protein sequence | MAMSAPDITQ LRGGLPGEKP GPDGAALDVV HALTGAIPQV VTVTAVVVTR GHSPFLATTL AALGAQDRPV DDVVIVDVDA TRTASASLGL RLDGPDGAPT PDGAGARFVP AAGARSFGEA VDLAIEAGAC GPHGWMWLLH DDAAPDPGAL SALLRAVEHT KAVAIAGCKQ RRWPVADDGT PLTPGEGGQV LVEVGHTVSP VGRRMTGIDD TEIDQGQHDA KEDVLAVGLA GAVVRTDVWQ ELGGTDPEYG AFGDGLDLCR RARRAGHRVV VVPEAVVHHA QASLLGLRAG RAPDEATSYG LRRRSQLHHR LVHVPAPLLI PAILGMVLWA PVAAMYRLAL KHPGEARDEI LAALWNALRV GPLLRARRNA TRTAMLPRRV LHPLLASWRQ VYRERRDVRL ARAEANRTRF APTELERVEL RKLALRRRAG LTVTVLATGG LALAVFGGWQ GVLAQGGRVV GGALLPAPGT VGDVWSAATS AWVSAGLGVR APADPVLVPL TVLTWLAGGS LQTAMNVLMV AALPLAALGA WFATGCVTRS TWARTVGALA WAGSPAFLVT LQTGRYGALL AHLALPWAAL ALVRAVGAQA RDEVEVPESA NPDPEVRVRQ VWRSDRLRRG SLGAAAAAGL LLAVAVSAAP VLLLVAVAVV AVGMVAAPRD RKNLLLALVP SAVVAAPFWM YVARTWTDGG WRLLLAEPGA VARTGEAPAG WQLLLGHAQV PQAWFGVGEG AHPLLVALAD AAPWVFGGLV VVLALAALAR PRVIGGVRTA WVVAAAGLVA GMLAVGQGAW AGPGASVVLL GLGGAALLGA PVAREALTDA DRTGWVALRR GVGLLAVTVL VLLPGAGALS WTLDQADGLR LGDLRATGEA VVPAVGRQMQ AAPRAARVLQ LGHDDGASDG GGTADGGGAA ADGVLGYSLL RADGTALIDS SVVARAQDDA TPDPVDTLVA ALAVGQAPGL AAGLADLGIG AVQVRADADA DLVTTLDMVP GLERVTEGDG TLLWRVGGDP EPPPGWARLV DVPAEAGTRP ATLAVLPSDG HRVTTNVPLA DAPDQERTLV LASAADRGWR ATLDGRRLPV VEADGLQAFA VPPAGGTLRV EHVSARQPLW FGLGGGVLLV YVLLALPVGR RRGR
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