| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2540 |
|---|
| Symbol | |
|---|
| ID | 8650083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 2776798 |
|---|
| End bp | 2778006 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | glycosyl hydrolase family 88 |
|---|
| Protein accession | YP_003327113 |
|---|
| Protein GI | 269957324 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACG CTGCGATGAC GGACGCATCG ACGAAGGACG CTGCGGTGAC GACCGACTGG
GCGCGCCTCG GCGCCGACAC CATGCTCGTC CGGGAGCCCG ACATGAACCC GGCCGGGAAG
TGGGAGTACG AGGACGGGCT CATGCTCGGC GGGATGCTCG AGATCCACCG GCTCACGGGC
GACCCGCGGT ACCTGGAGTA CGCACGGGCC AACCTCGACC GGTTCGTGCG GCCGGACGGG
TCGATCCTCG GCTACCGCGC CGACGAGTGG AACCTCGACC ACGTCAACAA CGGCAAGGTG
GCGCTCGACC TGTACGAGGC CACCGGCGAC GAGCGCTACC TCAAGGCCGC CGACCTGCTC
TTCGCGCAGC TCCTCGGCCA GCCGCGCCTC GACGCAGGGA CGTTCTGGCA CAAGCAGATC
TACCCGTACC AGACGTGGCT CGACGGCCTC TACATGGGCT CGGTGTTCTA CGCGCGCTAC
TGCCGCCTCA CGGGCCGGGA CGATCTGTGG GACGACGTCG CCCTGCAGTT CACGACGGCG
TACGCGCTCA CGCTCGAACC GTCGGGCCTG TGCGCGCACG CGTACGACGA GACGCGATCG
ATGCCGTGGG CCGACCCCAC CACCGGCCGC TCGCCGCACG TGTGGCTCCG GGCCCTCGGC
TGGTTCGTGA TGGCCATGAC GGACGTGCTC GAGCACCTGC CCGTCGACCT CCCCCAGCGC
GCCGCCGTGC ACCAGCAGCT CCGGTCGCTG CTGACGGCGC TGCGCTCGGT CGCCGACGAG
CGCACCGGGC TGTGGTTCCA GATCCCCGAC CAGGCGGGCC GCCCGCTCAA CTACCTGGAG
GCGTCGGGCT CGTTCATGGT GCTCGCCGCC GTGGCCAAGG GTCTGCGGCT CGGGTATCTG
GACGCCGCGG AGTGGGGCGC GCACCTGGAG CGCGCCTGGG CTGCGGGCGT CGACGAGTTC
CTCACCGTCA CCGCCGAGGG CTGGGTCGAC GTCAACCGGA TCTGCCAGGT CGCCGGGCTC
GGCGGCCCGG CCCAGCGTGA CGGCTCCTAC GGGTACTACA TGAGCGAGCC GATCGTCGCC
AACGACCACA AGGGCGTGGG CCCGTTCCTC CTGCTCGCCG CGGAGATGGG CCGCCGCGCC
GGGTCACCGG GTCACAGGGG GCGCGCGTCC GACTCCAGGA GCACGGGGAT GCCCTCACGC
ACCGGGTAG
|
|---|
| Protein sequence | MTDAAMTDAS TKDAAVTTDW ARLGADTMLV REPDMNPAGK WEYEDGLMLG GMLEIHRLTG
DPRYLEYARA NLDRFVRPDG SILGYRADEW NLDHVNNGKV ALDLYEATGD ERYLKAADLL
FAQLLGQPRL DAGTFWHKQI YPYQTWLDGL YMGSVFYARY CRLTGRDDLW DDVALQFTTA
YALTLEPSGL CAHAYDETRS MPWADPTTGR SPHVWLRALG WFVMAMTDVL EHLPVDLPQR
AAVHQQLRSL LTALRSVADE RTGLWFQIPD QAGRPLNYLE ASGSFMVLAA VAKGLRLGYL
DAAEWGAHLE RAWAAGVDEF LTVTAEGWVD VNRICQVAGL GGPAQRDGSY GYYMSEPIVA
NDHKGVGPFL LLAAEMGRRA GSPGHRGRAS DSRSTGMPSR TG
|
|---|
| |