| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2413 |
|---|
| Symbol | |
|---|
| ID | 8649955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 2630791 |
|---|
| End bp | 2633106 |
|---|
| Gene Length | 2316 bp |
|---|
| Protein Length | 771 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | glycogen debranching enzyme GlgX |
|---|
| Protein accession | YP_003326986 |
|---|
| Protein GI | 269957197 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.246896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG CACGAGCCGC CGAGCACCCC GCGCCACGTC CGGTGGTGCG CCCGCTGACG
CGCCCGACCG CACGCCGTTC GCACGTCCCC CCGCTCGGGG TCACGGCGAC GGCCGGCGGG
GTCGACGTCG CCGTCGTCGC GTCGCACGCG ACCGCCGTCG ACTTCTGCCT CATCGACGTC
GTGCAGCCGC ACCTGCCCGA GGACGACCCG GCACGCTACG CCGAACGGCG CGTGCCGCTG
TTCGGGCCGA CGTACGGCGT GTGGCACGCG CACGTGCCGG GCGTGCGGCC GGGCCAGCGT
TACGGGTTCC GCGCGCACGG GGCGTGGGAC CCCCGCTCGG GCCTGCGGCA CAACCCCGCC
AAGCTGCTCC TCGACCCGTA CGCGCGCGGC CTGGCAGGCA CGCTGCGCTA CGGGCCCGAG
GTCCTGGGCG CGGTCGGCGC CCCGCGCTCG GACGACCCGA CGACGCCCGA CGGCGGCTGG
TGGCTCGCGG AGCGGTACGG CGAGGCGGAC ACCACCGACT CGTTGCCGTT CGTGCCGCAC
GCGGTGGTGC TGCCGCCGAT GGACGCGGCA CCGCCGCTCT CGCGGCCCCG CGTGCCGTGG
GCGGACACCG TGGTCTACGA GGCGCACGTC CGCGGCTTCA CCCTGCTCAA CGAGGCCATC
CCGGCCGAGC TGCGCGGCAC CTACGCGGGC ATGGCCCACC CGGTGACGAT CGCGCACCTC
AAGGAGCTCG GCGTCACCAC CCTCGAGCTG CTGCCGATCC ATGCGATCGC GTCCGAGCCG
CGGCTGGACG CCCACGGCCT GTCCAACTAC TGGGGGTACT CGACGCTCGG GTTCTTCGCG
CCCGAGCCGC GCTACGCGAC CCGCCAGGCG CAGGAGACGG GACCCGAGGC CGTGCTGCAC
GAGGTCCGGG GCATGGTGCA CCTGCTGCAC CAGGCGGGCA TCGAGGTCAT CCTCGACGTC
GTCTACAACC ACACGTGCGA GGGCGGCGAC GACCAGCTCC ACGTGTCGTG GCGCGGCCTG
GACAACACCC TGTACTACCT GCACGACGGC AACGCGCCGG CCGCACTCGC CGACGCCACC
GGGACGGGCA ACACGCTCGA CTTCCGCCGC ATGCGGGTGG TGCAGATGGC GCTGGACTCG
CTGCGTTACT GGGCGCAGGA CGTGGGCGTC GACGGGTTCC GCTTCGACCT GGCCGTGACC
CTGGGGCGCG GCACCTACGG GTTCGAGCCG GACCACCCGT TCCTCGTCGG GCTGCAGACC
GACCCCGTGC TCAACAACCT CAAGCTCATC GCGGAGCCGT GGGACGTCGG CCCCGGCGGC
TGGCAGACGG GCAGCTTCCC GCCGCCGATG GCCGAGTGGA ACGACCGGTT CCGGGACGCG
ATGCGCGGGT TCTGGCTCGC GTCTGCGGCG GCCGGTGCGC GGGGCCGCCC CATGGACGGC
GTGCGCGAGC TCGCCACCCG CCTGTCCGGC TCGGCCGACC TGTTCGGTCA CTCCGACCCG
CCGCTCGTGC GCGGCCCGGT CGCGTCGATC AACTACGTGA CGGCGCACGA CGGGTTCACC
CTCGCGGACC TCGTGGCGTT CGACCACAAG CACAACTGGG CGAACGGCGA GGACAACCAC
GACGGCACGT CGAACAACCT GTCGTGGAAC CACGGCGTCG AGGGGCACAC CGGGGTGGGT
GACGACGCCA CGACCGAGCC GTGGTCCGCC GTCGTGCCGC TGCGGCGCCG CTCGCAGCGC
AACCTGCTGG CGATGCTGCT GCTCTCGGCG GGCACGCCGA TGCTGACCGC GGGCGACGAG
TTCGGGCGCT CGCAGGACGG CAACAACAAC GCCTACGCGC AGGACAACGC GATCTCGTGG
GTGCGCTGGG ACCGCGAGCG GATGGACGCC GACCTGCTGG AGACCGCGCG GTTCCTGCTC
ACGCTGCGCC GGGAGCACCC GGCGCTGCGC GCGGACTCGT TCTTCCTCGG CACGCCGCGG
CCCGGCGAGG AGCACGCCGA CCTGCTGTGG TTCACCGAGG CGGGCACGCC GATGGACAAC
GCGGCGTGGA ACGAGCCGGA GCGGCGGGTC GTGCAGATGC TGCGGCCCGG CCCGGGTGCG
GGCGACTGCG ACGTGCTCGT GGTGATCAAC GGCCGCCTCG GCGACCTCGA CGTGACGCTG
CCGCCCCTGC TTCCCGGTGC ACGCACGTGG GACGTCGTGT GGAGCTCCAC GTGGGACACG
CCGGTCGAGC CGGAGGACGA GCGGGAGGAC GACCTGGACG GCGCGCAGCG CCTCGAGGCC
CTCACCGTCA AGGTTCTCCT GGCCCGCCGG GACTGA
|
|---|
| Protein sequence | MNAARAAEHP APRPVVRPLT RPTARRSHVP PLGVTATAGG VDVAVVASHA TAVDFCLIDV
VQPHLPEDDP ARYAERRVPL FGPTYGVWHA HVPGVRPGQR YGFRAHGAWD PRSGLRHNPA
KLLLDPYARG LAGTLRYGPE VLGAVGAPRS DDPTTPDGGW WLAERYGEAD TTDSLPFVPH
AVVLPPMDAA PPLSRPRVPW ADTVVYEAHV RGFTLLNEAI PAELRGTYAG MAHPVTIAHL
KELGVTTLEL LPIHAIASEP RLDAHGLSNY WGYSTLGFFA PEPRYATRQA QETGPEAVLH
EVRGMVHLLH QAGIEVILDV VYNHTCEGGD DQLHVSWRGL DNTLYYLHDG NAPAALADAT
GTGNTLDFRR MRVVQMALDS LRYWAQDVGV DGFRFDLAVT LGRGTYGFEP DHPFLVGLQT
DPVLNNLKLI AEPWDVGPGG WQTGSFPPPM AEWNDRFRDA MRGFWLASAA AGARGRPMDG
VRELATRLSG SADLFGHSDP PLVRGPVASI NYVTAHDGFT LADLVAFDHK HNWANGEDNH
DGTSNNLSWN HGVEGHTGVG DDATTEPWSA VVPLRRRSQR NLLAMLLLSA GTPMLTAGDE
FGRSQDGNNN AYAQDNAISW VRWDRERMDA DLLETARFLL TLRREHPALR ADSFFLGTPR
PGEEHADLLW FTEAGTPMDN AAWNEPERRV VQMLRPGPGA GDCDVLVVIN GRLGDLDVTL
PPLLPGARTW DVVWSSTWDT PVEPEDERED DLDGAQRLEA LTVKVLLARR D
|
|---|
| |