Gene Xcel_2408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_2408 
Symbol 
ID8649950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp2624201 
End bp2625403 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content75% 
IMG OID 
ProducttRNA(5-methylaminomethyl-2-thiouridylate)- methyl transferase 
Protein accessionYP_003326981 
Protein GI269957192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTGC TGGCCGCCAT GTCCGGCGGC GTGGACTCCG CGGTCGCCGC GGCGCTCGCG 
GTCGAGGCGG GGCACGACGT CGTCGGCGTG CACATGGCGC TGTCCCGCAA CCGGGACCAG
TTCCGCACCG GGTCGCGCGG CTGCTGCTCG ATCGAGGACG CGTCGGACGC GCGGCGGGCC
GCCGACGTGC TCGGCATCCC GTACTACGTG TGGGACCTCT CGGAGCGGTT CGAGGACACG
GTCGTGGCGG ACTTCCTCGC CGAGTACGAG GCGGGCCGCA CGCCCAACCC GTGCGTGCGC
TGCAACGAGC ACATCAAGTT CGAGACCCTG CTGGAGAAGG CCACGGCGCT CGGCTTCGAC
GCGGTCGCGA CGGGCCACTA CGCGCGGGTC GTGGAGAGGC CCGACGGGAC CCGCGAGCTG
CACCGGTCCC CGAACACCGA GAAGGACCAG TCGTACGTGC TGGCCGTCAT GGGCCCCGAG
CGGCTGGCGC GTGCGATCTT CCCGCTGGGC GGGTTCGCCT CCAAGGCCGA GGTCCGCGCC
GAGGCCGCCC GCCGCGGGCT CGCCGTCTCG GCCAAGCCCG ACTCGTATGA CATCTGCTTC
GTCGCCGACG GCGACACCCG CGGGTTCCTG CGCGACCGGC TCGGGTCCCG GCCGGGCGAG
GTGGTCGACA CCTCCGGTGC GGTGGTGGGG GAGCACGACG GCGCGTACGC GTACACGGTG
GGCCAGCGCA AGGGCCTCGC GCTCGGGCGT CCGGCCGCGG ACGGCAAGCC ACGCTACGTG
CTGGACGTGC GGACCTCGAC GAACCAGGTC GTCGTCGGCC CCGCCGAGCT GCTGACGGTC
GACCGGATCG CGGGCGACCG TGCCGTCTGG TTCACCGACC CCGCTCCCGG GCCGCGAGCG
TCCCGCGATG TCGGTCTCCC GACCCCGGAC ACCGACGTTC CGGGACGTCC GTCGAGCCCC
GTCGACGACG TCGAGATCCA GGTCCGCGCG CACGGGACCC CGGTCCCGGC GCGGATCCTC
GACGCTGCCG ACGGCGGCGT CGAGGTCGAG CTCACCGGCA CCCCGCTGCG CGGCGTCGCG
GCGGGCCAGT CGCTCGTCGT CTACCGCGGC ACCCAGGTGC TGGGCCAGGC GACGGTCACG
CGCGCCTGGC GCGCGGCGTC GAGACACCGG ACCCACGACG CGTCGACGGC GCGGCCCGCA
TGA
 
Protein sequence
MRVLAAMSGG VDSAVAAALA VEAGHDVVGV HMALSRNRDQ FRTGSRGCCS IEDASDARRA 
ADVLGIPYYV WDLSERFEDT VVADFLAEYE AGRTPNPCVR CNEHIKFETL LEKATALGFD
AVATGHYARV VERPDGTREL HRSPNTEKDQ SYVLAVMGPE RLARAIFPLG GFASKAEVRA
EAARRGLAVS AKPDSYDICF VADGDTRGFL RDRLGSRPGE VVDTSGAVVG EHDGAYAYTV
GQRKGLALGR PAADGKPRYV LDVRTSTNQV VVGPAELLTV DRIAGDRAVW FTDPAPGPRA
SRDVGLPTPD TDVPGRPSSP VDDVEIQVRA HGTPVPARIL DAADGGVEVE LTGTPLRGVA
AGQSLVVYRG TQVLGQATVT RAWRAASRHR THDASTARPA