| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2397 |
|---|
| Symbol | |
|---|
| ID | 8649939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2606796 |
|---|
| End bp | 2607797 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_003326970 |
|---|
| Protein GI | 269957181 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCGCC CGATCACGCT GTTCACCGGC CAGTGGGCCG ACCTCCCGCT CGAGGAGGTG
GCGCGCCTGG CCTCCGGCTG GGGGTACGAC GGCCTCGAGC TCGCCTGCTG GGGCGACCAC
CTCGACCCGT GGCGCTGGGA CGACGACGCC TACGTCGCGG ACCGGCTGGA CCTGCTGGAG
CGCCACGGCC TCAAGGTCTG GGCGATCTCC AACCACCTCA AGGGCCAGGC GGTGTGCGAC
GACCCCATCG ACCAGCGGCA CCGCGACATC CTCTCGGACC ACGTCTGGGG CGACGGCGAC
CCCGAGGGCG TGCGGCAGCG CGCGGCCGAG GAGATGCAGA ACACCGCACG CCTGGCCGCG
AAGCTCGGCG TCAAGACCGT CATCGGCTTC ACGGGTTCGT CCATCTGGAA GTACGTGGCG
ATGTTCCCCC CGGCGTCGGA GGCGATGGTG GAGGCGGGCT ACCAGGACTT CGCCGACCGC
TGGAACCCGA TCCTCGACGT CTTCGACGAG GTCGGCGTGC GCTTCGCGCA CGAGGTCCAC
CCGAGCGAGA TCGCCTACGA CTACTGGACG ACGGTGCGCA CCCTGGAGGC GATCGGCCAC
CGTGAGGCGT TCGGCCTCAA CTGGGACCCG TCGCATATGG TGTGGCAGGA CGTCGACCCG
GTCTCGTTCC TCTGGGACTT CCGGGACCGG ATCTACCACG TCGACTGCAA GGACACGAAG
AAGCGCCTGG GCAACGGCCG CAACGGGCGC CTGTCCTCGC ACCTGCCGTG GGCCGACCCA
CGCCGCGGCT GGGACTTCAT CTCGACCGGC CACGGCGACG TCCCGTGGGA GGACGCCTTC
CGCATGCTCA GCACCATCGG GTACGACGGC CCGCTCTCGA TCGAGTGGGA GGACGCCGGC
ATGGACCGCC TGCTCGGGGC ACCCGCGGCG CTCGCGTTCG TCCGCGCGCT CGCGTTCGAC
CCGCCGTCGG CCGCGTTCGA CGCCGCGTTC TCGTCCCGCT GA
|
|---|
| Protein sequence | MPRPITLFTG QWADLPLEEV ARLASGWGYD GLELACWGDH LDPWRWDDDA YVADRLDLLE
RHGLKVWAIS NHLKGQAVCD DPIDQRHRDI LSDHVWGDGD PEGVRQRAAE EMQNTARLAA
KLGVKTVIGF TGSSIWKYVA MFPPASEAMV EAGYQDFADR WNPILDVFDE VGVRFAHEVH
PSEIAYDYWT TVRTLEAIGH REAFGLNWDP SHMVWQDVDP VSFLWDFRDR IYHVDCKDTK
KRLGNGRNGR LSSHLPWADP RRGWDFISTG HGDVPWEDAF RMLSTIGYDG PLSIEWEDAG
MDRLLGAPAA LAFVRALAFD PPSAAFDAAF SSR
|
|---|
| |