| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2390 |
|---|
| Symbol | |
|---|
| ID | 8649929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2592537 |
|---|
| End bp | 2594399 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | dihydroxy-acid dehydratase |
|---|
| Protein accession | YP_003326964 |
|---|
| Protein GI | 269957175 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGC CCCTGCGTTC CCGCACCTCC ACCCACGGCC GCAACATGGC GGGCGCACGC
TCCCTGTGGC GCGCCACCGG CATGAGCTCC GAGGACTTCG GCAAGCCGAT CATCGCGATC
GCGAACTCCT ACACGCAGTT CGTCCCCGGC CACGTGCACC TCAAGGACAT GGGCGACCTC
GTCGCCTCGG CGATCCGGGA GGCCGGCGGC GTCGCCAAGG AGTTCAACAC CATCGCCGTC
GACGACGGCA TCGCGATGGG CCACGCGGGC ATGCTCTACT CGCTGCCCTC GCGCGACCTC
ATCGCGGACT CCGTCGAGTA CATGGTCAAC GCCCACACCG CCGACGCGCT GGTCTGCATC
TCGAACTGCG ACAAGATCAC GCCGGGCATG CTCAACGCGG CGCTGCGGCT GAACATCCCG
GCCATCTTCG TCTCGGGCGG GCCCATGGAG GCCGGCAAGG CGATCGTCGT CGACGGCGTC
GCCCAGACCA AGCTCAACCT CATCAACGCG ATCAACTACT CCGCGGACGA CGACGTCACC
GACGGTGCGC TCGCCCAGGT CGAGGAGAAC GCCTGCCCCA CCTGCGGGTC GTGCTCCGGC
ATGTTCACCG CCAACTCGAT GAACTGCCTC ACCGAGGCCC TCGGACTGTC CCTGCCCGGC
AACGGCTCGA CGCTGGCGAC CCACACCGCG CGCAAGGAGC TGTTCCTCGA GGCCGGCCGC
ACCATCGTCG ACCTCGCCAA GCGCTACTAC GAGGACGAGG ACGACACCGC GGCACCCCGC
GGCATCGTCA CGAAGGCCGC GTTCACCAAC GCGATGACCC TCGACGTCGC CATGGGCGGC
TCCACCAACA CGGTGCTGCA CATCCTCGCC GCGGCCCAGG AGGCCGGCGT CGACTTCACG
CTCGACGACA TCGACACGAT CTCGCGCCGC GTGCCCTGCC TGAGCAAGGT CGCCCCGAAC
CACCCGGACT ACCACATGGA GGACGTGCAC CGCGCAGGCG GCATCCCCGC CCTGCTCGGC
GAGCTCGACC GCGGCGGCCT GCTCGACCAC GACGTCACCT CCGTGCACAC GCCCACGCTG
CGCGCCTGGC TCGACGCGTG GGACATCCGC GGCGGCGCCC CCAGCGAACG CGCGCAGGCC
CTCTTCCACG CCGCCCCCGG CGGGGTGCGC ACCACGCAGG CCTTCTCGAC GTCGAACGTC
TGGGACTCCC TCGACACCGA CGCGGCCGAA GGCTGCATCC GCGACGTCGA GCACGCCTAC
ACGGTCGAGG GCGGCCTGGC CGTGCTCAAG GGCAACCTCT CCGAGGACGG CGCGATCATC
AAGACCGCCG GCATCGACCC CGACGTCTTC CACTTCGTGG GCAAGGCGCT CGTCGTCGAG
TCGCAGGACG AGGCCGTCGA GAAGATCCTC ACCAAGCAGG TCCAGCCAGG GCACGTCGTC
GTCGTGCGCT ACGAAGGGCC GTCCGGCGGG CCGGGCATGC AGGAGATGCT CTACCCGACC
TCCTTCATCA AGGGGCGCGG CCTGGGCAAG GTCGTCGCGC TCATCACCGA CGGGCGCTTC
TCCGGCGGGT CGTCGGGCAT CTCGGTCGGG CACGTCTCCC CGGAAGCCGC CGCAGGCGGC
ACCATCGGCC TGGTCGAGGA CGGCGACGAG ATCGAGATCG ACGTCGAGTC GCGGCTCATC
CGGGTCAACG TGCCCGACGA GGTGCTCGCC GAGCGACGCG CCAAGATGGA GGCGTCGGAG
CGTCCGTGGC AGCCGAAGGA CCGCGACCGG TATGTGTCGC CGGCGCTGCA GGCGTATGCG
GCGATGGCTA CGTCGGCGGA CCGTGGGGCT GTGCGGGACG TGTCGCTGAT CAAGCGGCGG
TAG
|
|---|
| Protein sequence | MSRPLRSRTS THGRNMAGAR SLWRATGMSS EDFGKPIIAI ANSYTQFVPG HVHLKDMGDL
VASAIREAGG VAKEFNTIAV DDGIAMGHAG MLYSLPSRDL IADSVEYMVN AHTADALVCI
SNCDKITPGM LNAALRLNIP AIFVSGGPME AGKAIVVDGV AQTKLNLINA INYSADDDVT
DGALAQVEEN ACPTCGSCSG MFTANSMNCL TEALGLSLPG NGSTLATHTA RKELFLEAGR
TIVDLAKRYY EDEDDTAAPR GIVTKAAFTN AMTLDVAMGG STNTVLHILA AAQEAGVDFT
LDDIDTISRR VPCLSKVAPN HPDYHMEDVH RAGGIPALLG ELDRGGLLDH DVTSVHTPTL
RAWLDAWDIR GGAPSERAQA LFHAAPGGVR TTQAFSTSNV WDSLDTDAAE GCIRDVEHAY
TVEGGLAVLK GNLSEDGAII KTAGIDPDVF HFVGKALVVE SQDEAVEKIL TKQVQPGHVV
VVRYEGPSGG PGMQEMLYPT SFIKGRGLGK VVALITDGRF SGGSSGISVG HVSPEAAAGG
TIGLVEDGDE IEIDVESRLI RVNVPDEVLA ERRAKMEASE RPWQPKDRDR YVSPALQAYA
AMATSADRGA VRDVSLIKRR
|
|---|
| |