| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2324 |
|---|
| Symbol | |
|---|
| ID | 8649860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2521309 |
|---|
| End bp | 2524596 |
|---|
| Gene Length | 3288 bp |
|---|
| Protein Length | 1095 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | helicase domain protein |
|---|
| Protein accession | YP_003326899 |
|---|
| Protein GI | 269957110 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTAC CGATGCCTAG AGTCGTCCAC AGGCGCGTCG ACGTGCCGGC CAATACACAA
GAACGAGGGA TCCCCAAGCA CGTGAGCACC CCGGTCGACA TTGAGCAGAC TGCCCCCGCC
TCCGTCGACG GTGGCCTGCC GCTCGTACCC GAACCAGGTC AGATCGTCGA GGTCCGCGGC
TCACGTTGGG CCGTCGCGAA CGTGGCCGCT CAAGGACTCC CGCGTAGCCC CGCCGACGAA
GGCCGGGCAC GCATTGACCA CGTGGTGAGC CTCCAGTCGC TGGACGAAGA CCGCATGGGC
GAGGAGCTCA CGGTCATCTG GGAGCTGGAG GTCGGCCACT CCGTCGCCCC AGACCAGGGC
CTCCCCGTCA CGATCGATGG CTTTGATGAC CCGAACCGTC TCGCCGCCTT CGTCGATGCT
GTTCGTTGGG GTGCCGTCAC GTCCGCCGAT GCCGGCGCCT TCCAGGCCCC GTTCCGGTCG
GGCGCCAACG TCGAGGCCTA CCAGCTCGAA CCGCTCCGCC GCGCGCTCGC CGCACCCCGC
ACGAACCTGC TCCTCGCCGA CGACGTCGGC CTCGGCAAGA CGATCGAGGC CGGGTTGGTG
ATCCAGGAGC TACTGCTCCG GCACCGAGCC CGCAGCGTCG TCATCGTCTG CCCGCCAAGC
CTCGCGGTGA AGTGGCAGGA CGAGATGCGT GAGAAGTTCG GCCTGGAGTT CGTGCTCGTC
AACTCCGAGC TCATGGCTGA GGTGCGCCGC AGCCACGGGC TTAACGCCAA CCCGTTCCGC
CTCTTCCCGC GCGTCATCGT CTCGATGGCG TGGCTACCGG GCATCCGCGC GCAGCGCCTT
CTGCGCGAGG TCTACTCCAG CGTTGGCCAG CCCAACAGTG CGCGCCGCTA CGCGTTCGAC
GTCCTGGTCG TCGACGAGGC GCACCATGTC GCGCCATCTA GCCCGACGGC GGTCGGCAAG
GCACGCGGCT ACGCGGTCGA CTCCAAGCGC ACCGAGGCGG TACGCGACCT CGCGAAGGTC
TGCGAGCACC GCCTGTTCCT GTCGGCCACT CCGCACAACG GCCACACGGA GTCATTCACG
GCGCTTCTCG AGATGATCGA CAACCGACGC TTCTCACGCG GCGCCTCCGT CGATGCCGCC
GCCCTCAAGG AGGTCACCGT CAGGCGCCTC AAGCGGGACA TCGTGGAGAA GGGCTTCAAG
AAGCGCGTTC TCGAGACGAT CCCCTTCGTG CCGAGTGACG AAGAGCAGGC CGCGTTCGAC
AAGCTCAACG CAATACTGGA GGCCTCCGCC CGCGCGAACG GCCGTCGGGG CAGTGGCGAC
ATCGTCTCGA TGCTCCTCAA GAAGCGCTTT CTCTCGAGCC CCTTCGCCTT CGGCACCACG
CTCGGCAGCT ACCTCGAGGC AGCGGCCGGC TCTGGCGCCG AGTGGGACGA CGACGAGGAC
GAGTACTACG CGGAGGTCAT GGGCAGCGGT CAGTCTGACG AGGAGGAGGG CGCGACCGAG
CACCCCGAGT TCACCGCGCT GCGCCAGGCC AAGACCACCG ACCGCACTAG CGACCCGCTC
GTGGCCGCGA CACCGCAGGA ACTCGCGGAG CTGCGAGCGT GGGGCCTCGG GTTCCAAGAC
CGCCCTGACT CTCGCCTGAA CGCGCTGATC ACCTGGCTCG ACGCGATCTG CCGCCCGGAC
AGTCACTGGA CCAACGAGCG GGTCGTCATC TTTACCGAGT ACGCCGACAC TCTCACGTGG
ATCGTCGGGA ACCTGCGCCA GCGCGGGTAC GGCACCGACC GGCTCGCCGT GATCGAGGGC
TCCACCGACG CCGAGGAGCG CGAGCTCACG CGCGCACGCT TCAACGCCGA TCCCGCCAAG
GAGAGCATCC GCGTGCTCGT GGCCACGGAC GCCGCCGGGG AGGGCATCGA CCTGCAAGCC
TTCTGCCACC GCCTGGTGAA CTTCGACGTG CCGTTCAACC CGTCGCGCCT CGAGCAGCGC
ATCGGTCGCA TCGACAGGTA CGGCCAGCAG CACGCCCCCG AGGTCTTCCA GTTCCTCCCG
GACGCGACGT CGGGAACGTT CGCGGGCGAC ATGGACTTCA TGCGTCGCAT CGCCGAGAAG
GTGGCAAACG TCGCCGACGA TCTCGGGTCC GTGAACCCAG TGATCGACGC TGACATTCAG
AACCGCTTCG GCCGCTCCGA GACGACAGCG AAGCGCACCA AGATTGCCGA CGACGGCGCG
AAGGTCATCA ACCAGCAGCT CGCTGGCGGC GCCGAGCTCA ACCGCAGCCT CACCCAGCTC
GCCAACACCT ACGGCGAGCA GAAGGCCGCG ATGCACCTGA CACCCGCCAA CTCCCGCCGC
GTGCTCGACA CCGCGCTGGA GCTCACCGCG CAACCCGCCC TCGTGGAGGT CGGCTCCGAC
CTCACTGATG CCCAGGTGTT CGAGGTGCCC AGCCTCGCCA GCTCCTGGCA GCCGGCGCTC
CGCGGCCTCG ACACCCGCCT GCGCCCCGGC GTGCCGCGCC CCATCACATT CGACGACGAA
GCCCTCCGTG ACCTGGTCAG CGACGAGTTG GTGCACGTGC ACCTGGGCCA CGGGCTCATG
CAGAAGGCGT CCCGCATCCT CCGCTCGAGC CTCTTTAGCG CGGAATCGCA GATGAACCGC
GTTACCGCCG TGGTGGTCGA CGGGATCGAA CAGTCCTGCG TCGCAGCCGT TTCCCGGCTC
GTCCTCGTCG GCCGCGGTGG ACTCCGCCTT CACGAGGAGG TGTTCCTCAC CGGTATCCGC
GTTCGCGGTC AGGCGCTCGC GGAGGCCAAG GTCGAGGCGC TCCTTGAGCA AACGCTCGAC
GCAGAGAACC TCGCCCTCGC CGATCCGAGG ATCCTCGAAC GGCTCGCGAC CGAGTGGAAC
ACCGACGACG GCCGCCTGCG CTCGCGGCTT GAGGCTGCAG TGCGACGCAA AGCGGACGCC
CGCCAGCAGG CTGTAGCCGC CGAGCTCGCG AAGCGCGAGG CCGCCGACAC CGGCCGCGCG
ACCGAAATCT TCGCGGCGTT CCGCCGCAAC CTCACCGACT CCCTCCAGCA CCTCAAGGCG
CTTGAGAAGG AAGCGGCCGA GACGCTGTTC ACGCTGCCCG AACAGCAGCG CCAGTTCCGC
AACGACATCC GCGCGATGGA AGACCGCCTC GCCGTTCTCT CCGACGAGGA GACTCGAGAG
ATCGCCGGCA TTCGCGAGCG GTACACCGAC GTCAAGCCGT ATGTTGCGGC CGCCGCCGTG
GTCTTCGCCT TGACCCCCGC CGACGCCCAG CAGGGAGACC TCGCATGA
|
|---|
| Protein sequence | MLLPMPRVVH RRVDVPANTQ ERGIPKHVST PVDIEQTAPA SVDGGLPLVP EPGQIVEVRG
SRWAVANVAA QGLPRSPADE GRARIDHVVS LQSLDEDRMG EELTVIWELE VGHSVAPDQG
LPVTIDGFDD PNRLAAFVDA VRWGAVTSAD AGAFQAPFRS GANVEAYQLE PLRRALAAPR
TNLLLADDVG LGKTIEAGLV IQELLLRHRA RSVVIVCPPS LAVKWQDEMR EKFGLEFVLV
NSELMAEVRR SHGLNANPFR LFPRVIVSMA WLPGIRAQRL LREVYSSVGQ PNSARRYAFD
VLVVDEAHHV APSSPTAVGK ARGYAVDSKR TEAVRDLAKV CEHRLFLSAT PHNGHTESFT
ALLEMIDNRR FSRGASVDAA ALKEVTVRRL KRDIVEKGFK KRVLETIPFV PSDEEQAAFD
KLNAILEASA RANGRRGSGD IVSMLLKKRF LSSPFAFGTT LGSYLEAAAG SGAEWDDDED
EYYAEVMGSG QSDEEEGATE HPEFTALRQA KTTDRTSDPL VAATPQELAE LRAWGLGFQD
RPDSRLNALI TWLDAICRPD SHWTNERVVI FTEYADTLTW IVGNLRQRGY GTDRLAVIEG
STDAEERELT RARFNADPAK ESIRVLVATD AAGEGIDLQA FCHRLVNFDV PFNPSRLEQR
IGRIDRYGQQ HAPEVFQFLP DATSGTFAGD MDFMRRIAEK VANVADDLGS VNPVIDADIQ
NRFGRSETTA KRTKIADDGA KVINQQLAGG AELNRSLTQL ANTYGEQKAA MHLTPANSRR
VLDTALELTA QPALVEVGSD LTDAQVFEVP SLASSWQPAL RGLDTRLRPG VPRPITFDDE
ALRDLVSDEL VHVHLGHGLM QKASRILRSS LFSAESQMNR VTAVVVDGIE QSCVAAVSRL
VLVGRGGLRL HEEVFLTGIR VRGQALAEAK VEALLEQTLD AENLALADPR ILERLATEWN
TDDGRLRSRL EAAVRRKADA RQQAVAAELA KREAADTGRA TEIFAAFRRN LTDSLQHLKA
LEKEAAETLF TLPEQQRQFR NDIRAMEDRL AVLSDEETRE IAGIRERYTD VKPYVAAAAV
VFALTPADAQ QGDLA
|
|---|
| |