Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_2257 |
Symbol | |
ID | 8649793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 2437221 |
End bp | 2439656 |
Gene Length | 2436 bp |
Protein Length | 811 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | M6 family metalloprotease domain protein |
Protein accession | YP_003326833 |
Protein GI | 269957044 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0974167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGAGAG TTCCAGCGAT CACCGCGGGA TTGGCGCTCG TCGGCGCCTG CCTTGCGGTT GCGCCCGCCG TCCAGGCGGT GCCCGTAGCG GACGTGCCGG AGTCGACGGT GATCCCGTCC GACGCCCTGC CCAACCCGCT GGCGGAGAAG CAGGCGGCCC TGCGTGAGCA GGCCATCCAG GATGTCCTGG CCGGCAACGC GACGGTCCAG ACCATCAACG GTTCCCGGGT CGTCGAGTTC ACCGACGCCC AGGAGCACGG CAAGGGCAAG GACAACAACG GCAAGGGCAA CGGCAAGGAC AACGGGAAGG GCAAGGGCAA GGACAACGGG AAGGGCGGCG GCAACGGGAA GGGCCACGGC AAGGGTGGCA ACGACCGGGG CAAGGGCAAG GGCGGCAAGG ACTCCTACCA GTCCCGGTAC GTCGAGCTCG CCCGCGAGGG CACCGACCGG ATCTTCGTCG TCCTCGTCGA GTTCGGCGAC CAGCAGCCGG ACTTCGCGCT CGACCCCGAC GCCCAGCGGC ACGAGGGTCC GCTGCACAAC GAGATCCCCG AGCCCGACCG CCGCACGGAC AACTCGACGG TCTGGACCGC GGACTACTCG CAGCAGTACT TCCAGAACCT CTACTTCGGC AAGGGCGAGT CGCTCAAGAA CTACATGGAG ACGCAGTCCT CGGGCCGTTA CAGCGTCGAC GGCGTCGTGA CCGACTGGGT CAAGGTCGAC TACACGCAGG GCCGCTACGG GACGGCCCGC TGCGACAGCA ACGTCTGCGC CGACGTCAAG CTGCTCATCC GCGACGCCGC CAAGGCGTGG GTGAACGCCC AGCTCGCCGC CGGCCAGACG ATGGACGAGA TCAAGGCGGA GCTCGCGACG TTCGACGTCC AGGACCGCTA CGACCTCGAC GGTGACGGCG ACTTCAACGA GCCCGACGGC TGGATCGACC ACTTCCAGAT CGTGCACGCG GGCGGCGACG AGGCGGACGG CGACCCGATC TACGCCACCG ACGCCATCTG GAGCCACCGC TGGTACGCCA ACCTGGCGTA CGGGCCCAGC TGCTTCGACG GCCGCGCCTG CAACACGGGC ACCCCGATCG GCGGCACCAT CAACGCCGAC GGCACGGTCA ACGAGACGGA CGACTTCACC GGGTTCTACG TCGGCGACTA CACCATGCAG CCGGAGAACG GCGGCCGGTC CGTCTTCTAC CACGAGTACG TCCACGACCT CGGTCTGCCG GACGACTACA ACTCGATCAT GGGCGGCGAC AACAACAACG AGCACTGGAC GCTCATGGCG CAGAGCCGCC TCGGTTCCAA GACCGACAAG GGCATCGGCG AGCGCGGCGG CGACCTGGGC GCCTGGAACA AGCTCCAGCT CGGCTGGCTC GACTACGAGT ACGTCGAGGC GGGCAAGAAG AAGACCGTCA AGCTCGGGGC CAGCGAGTAC AACAACAAGA GACCGCAGGC CGTCGTCGTC GGCCTGCCGG ACAAGGAGGT CACGCACGAG TTCGACCCGC CGTTCGAGGG CGAGGGCCAG TACTACTCCG GCCACGTCGA CAACTCGATC CTCAACCTGG CGCGGACGGT GACCGTCCCG GCCGACGACC CCGTGCTGGC CTTCCAGACC AGGTACGACA TCGAGGCGGG CTACGACTAC GTCCAGGTGC TCGCCGACGG CGCGCAGGTG GACGTGTGGG ACGGCACCCA GGCCGAGTGG GCCGAACGGA CCGTCGACCT GTCCGCCTAC GCCGGGCAGA CGATCGAGCT GACCTTCGCG TACGTCACCG ACCCCGCCGT GTCGGGCGAC GACCCGGACG TCCCGGACGG CATCCTGCTC GACCAGATCA CGCTGGGCGG TGTCGTGATC GGCGACGCCG AGGGCGGCCT GGGCGAGTGG ACGACCAACG GCTGGATCGT GGCCGGCGTG TCGTACGTGA CCAGCCACCC CGGCTACTAC ATCGCCGCCA GCCGCACCTA CGTGAGCTAC GACCAGTACC TCAAGACGGG GCCGTACTTC TTCGGATACG GCACGGCGCT GCCGGACAAG GTCGACCACT ACGCGTACCA GCAGGGTCTG CTGATCTCCT ACTGGGACAC GTCGCACACC AACAACGACA CGATGCTGCA CCCCGGCGAG GGCCGGAACC TGTACATCGA CGCGCACCCG AAGCCGTTCG CGCAGACCTC CACCGGGGCG CTGTGGCGTT CCCGCGTGCA GGTCTACGAC GCGCCGTTCG GCCTCACCAA GACGGACAAG GTCACCCTGC ACGTCGACGG TGTCCCGAAC ACCTTCGGCG GGCTCAAGGG GGTACCGACC TTCCGTGACA CCGACAAGTA CTTCTACGAG GAGCTGCCGA ACCACGGCGT CAAGCTCCCG GGTCACGGGG TCAGCATCTC GGTGCAGAAC CAGAACGGGA CCGACATGAC GGTGAAGGTC AGCTGA
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Protein sequence | MRRVPAITAG LALVGACLAV APAVQAVPVA DVPESTVIPS DALPNPLAEK QAALREQAIQ DVLAGNATVQ TINGSRVVEF TDAQEHGKGK DNNGKGNGKD NGKGKGKDNG KGGGNGKGHG KGGNDRGKGK GGKDSYQSRY VELAREGTDR IFVVLVEFGD QQPDFALDPD AQRHEGPLHN EIPEPDRRTD NSTVWTADYS QQYFQNLYFG KGESLKNYME TQSSGRYSVD GVVTDWVKVD YTQGRYGTAR CDSNVCADVK LLIRDAAKAW VNAQLAAGQT MDEIKAELAT FDVQDRYDLD GDGDFNEPDG WIDHFQIVHA GGDEADGDPI YATDAIWSHR WYANLAYGPS CFDGRACNTG TPIGGTINAD GTVNETDDFT GFYVGDYTMQ PENGGRSVFY HEYVHDLGLP DDYNSIMGGD NNNEHWTLMA QSRLGSKTDK GIGERGGDLG AWNKLQLGWL DYEYVEAGKK KTVKLGASEY NNKRPQAVVV GLPDKEVTHE FDPPFEGEGQ YYSGHVDNSI LNLARTVTVP ADDPVLAFQT RYDIEAGYDY VQVLADGAQV DVWDGTQAEW AERTVDLSAY AGQTIELTFA YVTDPAVSGD DPDVPDGILL DQITLGGVVI GDAEGGLGEW TTNGWIVAGV SYVTSHPGYY IAASRTYVSY DQYLKTGPYF FGYGTALPDK VDHYAYQQGL LISYWDTSHT NNDTMLHPGE GRNLYIDAHP KPFAQTSTGA LWRSRVQVYD APFGLTKTDK VTLHVDGVPN TFGGLKGVPT FRDTDKYFYE ELPNHGVKLP GHGVSISVQN QNGTDMTVKV S
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