| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2241 |
|---|
| Symbol | |
|---|
| ID | 8649775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 2420486 |
|---|
| End bp | 2422018 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | malate/quinone oxidoreductase |
|---|
| Protein accession | YP_003326817 |
|---|
| Protein GI | 269957028 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000570107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGATG AATCCCTGAA CACCACGGAT CAGGTCGACG TCGTCCTCAT CGGCGGCGGC
ATCATGAGCG CCACCCTCGG CACGCTGCTC CAGCAGCTCG AGCCGACCTG GACGATCCGC
CTGTACGAGC GCCTCGACGA CGTCGCGCTC GAGTCGAGCA ACCCGTGGAA CAACGCCGGG
ACCGGGCACG CCGCGCTGTG CGAGCTGAAC TACACGCCCG AGCGCAAGGA CGGCTCGATC
GACATCTCCA AGGCGGTGAA GATCAACGAG CAGTTCGAGG TGTCCCGCGA GTACTGGCAC
CACCTGCTCG CGCAGGGCGC GCTGACCGGC ACCGACTTCC TCCAGCGCAC CCCGCACATG
ACGTTCGTGC GCGGCGAGCG GAACGTCGAC TTCCTGCGTC GCCGGCACGA GACGCTCTCG
GCGCACCCGC TGTTCAAGGA CATGGAGTTC ACCACCGACC GCGCGCGGAT CGCCGGATGG
TCGCCCCTGC TGGTCGAGGG CCGCGACGAG GCCGAGCCGG TCGCCGCCAC CCGCAACACC
GCCGGCACCG ACGTCGACTT CGGTGCGCTG ACCCACCAGC TGATCGACTC GATGGTCGCG
CGCGGCGCGG ACGTGCGCCT CCAGCACGAG GTCCGCTCGA TCCGCCGCAC GCGCGACGGT
CGCTGGCGGA TCAAGGTCAA GGACCGTTCG TGGAACGCGG CCCGCCGGCA CCACACGGTC
AGCGCCCGGT TCGTGTTCGT CGGTGCGGGC GGCGGCGCGC TGCCGCTGCT GCAGTCGGCG
GGCATCCCGG AGATCAAGGG CTTCGGCGGC TTCCCCATCT CGGGCGAGTT CCTGCGCACC
TCGAACCCCG AGCTCGTCGC CCGCCATCGG GCCAAGGTGT ACGGCAAGGC CGACGTCGGC
GCGCCGCCCA TGTCGGTGCC GCACCTCGAC ACGCGTGTGG TGGACGGGCA GTCGTACCTG
ATGTTCGGCC CGTACGCCGG GTTCAGCCCC AAGTACCTCA AGAAGGGCAA GTACCTGGGC
CTGGTCACGT CGCTGCGCGC CCACAACCTC ACCTCGATGC TCGGCGCGGG CATCAAGAAC
ATGGACCTCA CGCAGTACCT GGTCGGCGAG CTCGTCGCCC GCCCCGAGAC CAAGTTCGCC
ACGCTCCAGG CCTTCTACCC CGAGGCGCAG CCCAAGGACT GGGAGCGGAT CACCGCCGGG
CAGCGCGTCC AGGTGATCAA GCGCGACAAG GACGGCAAGG GCGTCCTGGA GTTCGGCACC
GAGGTGGTCG CGGCGGCCGA CGGCTCGATC GCCGGCCTGC TCGGCGCCTC CCCCGGCGCC
TCGACCGCCG TCTCGGCCAT GGTCGAGCTG CTCGGCCGCT GCTTCCCGGC CCACGCCGAG
GCCTGGCGCC CGCACCTGGC CCGCATGATG CCGAGCCTCG ACGGCGTCCC CGGTGACACG
CACACCCTCG CCGACGAGCA CCACGCCGAC GCGCACGGCC TGGTGCTGGA CGCCGAGGCG
TACGAGTCCG CCGAGGCCGA CGCCCGCGCC TGA
|
|---|
| Protein sequence | MTDESLNTTD QVDVVLIGGG IMSATLGTLL QQLEPTWTIR LYERLDDVAL ESSNPWNNAG
TGHAALCELN YTPERKDGSI DISKAVKINE QFEVSREYWH HLLAQGALTG TDFLQRTPHM
TFVRGERNVD FLRRRHETLS AHPLFKDMEF TTDRARIAGW SPLLVEGRDE AEPVAATRNT
AGTDVDFGAL THQLIDSMVA RGADVRLQHE VRSIRRTRDG RWRIKVKDRS WNAARRHHTV
SARFVFVGAG GGALPLLQSA GIPEIKGFGG FPISGEFLRT SNPELVARHR AKVYGKADVG
APPMSVPHLD TRVVDGQSYL MFGPYAGFSP KYLKKGKYLG LVTSLRAHNL TSMLGAGIKN
MDLTQYLVGE LVARPETKFA TLQAFYPEAQ PKDWERITAG QRVQVIKRDK DGKGVLEFGT
EVVAAADGSI AGLLGASPGA STAVSAMVEL LGRCFPAHAE AWRPHLARMM PSLDGVPGDT
HTLADEHHAD AHGLVLDAEA YESAEADARA
|
|---|
| |