| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2162 |
|---|
| Symbol | |
|---|
| ID | 8649696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2326436 |
|---|
| End bp | 2327683 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003326738 |
|---|
| Protein GI | 269956949 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.183799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCC GCATTCCCCT CATCGGCACG ACTCTCGCAG TCGCCCTCAC CCTCACCGCC
TGCGGTGGCG GGACGCCGGA AGCCGAGCCC ACCGACGAGC CGACCGCCAC TCCGACCCAG
GACGCGGGCG AGGACACCGG CACCACGCTG ACCATGTGGG TCGACGAGAC CCGCCTCGGC
CCGGTCCAGG CCGCAGCGGA CGGCTTCACC GCCGAGACCG GCATCGAGAT CGAGCTCGTC
CAGAAGAACT TCGAGGACCT CGGCCCCGAC TTCGTCGCCC AGGTGCCGAC CGGCGAGGGC
CCGGACATCA CCGTGTGCAC GCACGACGGC ATCGGCGGCT GGATCCAGAA CGGCGTGGTC
GCCCCGCTGA CCATCGCCGA CCCGGCGCAG TTCAAGGACG TCGCGATCGA GGCGTTCACG
CACGACGGCC AGATCTTCGG CCTGCCGTAC GCCATCGAGA ACATCGCCCT GATCCGTAAC
GTCGACCTCG CCCCCGAGGC CCCGACGACG TGGGACGAGG CCGTCTCGAT GGCCGAGGCC
GTGGGCATCA CCGACTTCCC GGTGCTGGTC CAGACCGGCA ACGAGTCCGA CCCGTTCCAC
TACTACCCGC TCCAGACGTC GTTCGGTGCC CCGGTCTTCG AGCAGAACGA GGACGGCTCG
TACACGGAGA CGATCGGGAT GGGCGGCGAC GCCGGTCACG CCTTCGCGAA CTGGCTCGCC
GCCGAGGGCG CTGCCGGTCG CCTCTCGATC GACCTGACCT ACGACATCGC CGTGGAGAAG
TTCGCCTCGG GCGAGTACCC GTTCATCATC GGTGGCCCGT GGATGCTCGA GTCGTTCCCG
GACGTGAACC TCTCGATCGA CACGATCCCG TCCGCGGGCG GCCAGCCCGC ACAGCCGTTC
GTCGGCGTCC AGGGCTTCTG CCTCTCCGCG CAGTCGCGCA ACTCCGTCGC CGCGACGAAC
TTCATCACCA ACTACCTGTC GACCGCTGAC GTCCAGACGG CGCTGTTCGT GGCCGGCAAC
CGCCCGCCGG CCCAGGTCGA CGCCGCCGAC GCCGCCGCCT CCGACCCGCT CGTCGCCGCG
TGGGCGGCCG TGGGCGCCGA GGGCGTCCCG ATGCCCGCGA TCCCGGCGAT GAACCAGGTG
TGGACCTTCT GGGGTGCCGC CCAGGCGCAG ATCATCTCGG GCGCCGCGAG CGATCCGGCC
GCAACCTGGG ACCAGATGAT CGCTGACATC CAGGCAGCGA TCGGCTGA
|
|---|
| Protein sequence | MRRRIPLIGT TLAVALTLTA CGGGTPEAEP TDEPTATPTQ DAGEDTGTTL TMWVDETRLG
PVQAAADGFT AETGIEIELV QKNFEDLGPD FVAQVPTGEG PDITVCTHDG IGGWIQNGVV
APLTIADPAQ FKDVAIEAFT HDGQIFGLPY AIENIALIRN VDLAPEAPTT WDEAVSMAEA
VGITDFPVLV QTGNESDPFH YYPLQTSFGA PVFEQNEDGS YTETIGMGGD AGHAFANWLA
AEGAAGRLSI DLTYDIAVEK FASGEYPFII GGPWMLESFP DVNLSIDTIP SAGGQPAQPF
VGVQGFCLSA QSRNSVAATN FITNYLSTAD VQTALFVAGN RPPAQVDAAD AAASDPLVAA
WAAVGAEGVP MPAIPAMNQV WTFWGAAQAQ IISGAASDPA ATWDQMIADI QAAIG
|
|---|
| |