| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2160 |
|---|
| Symbol | |
|---|
| ID | 8649694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2323807 |
|---|
| End bp | 2324730 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003326736 |
|---|
| Protein GI | 269956947 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.493625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCG AGACCGTCAC CAGCGTCGAC ACCCAGGCGA TCATCGAGGC CGAGAGGCAG
AAGCTGCGCT CGCGGATGAA GCCCGGGCGC TACATGCGCG AGCTCGGCTG GCGGCACGTC
ATCGGCCTGG CCGCCGTCAT CTACGCGCTC TTCCCGATCG TCTTCATCAT CTCGGCGTCG
CTGAACCCGG GCGGCACGAT GACCGGGTCC AACCAGCTCT TCAGCTCGAT CGACCTCGCG
AACTACACGG CCCTCAACGA GACGCGGTTC TGGACCTGGT TCGGCAACTC GCTGTTCATC
TCGGTGACGA CGGCCGTCGG CACGGTGCTC ATGGGCGCGG CCGCCGCGTA CGCCTTCTCC
CGGTTCCGGT TCACGGGCCG GCGGATCGGC CTGACGGCTC TGCTCGTCAT CCAGATGTTC
CCGCAGATGC TCGCGTTCGT CGCCGTGTTC CTGCTGGTGA TGCTGATCGG GCAGGTGTTC
CCGAGCCTCG GGTTCAACTC GTCGATCACG CTGATCGCCG TGTACCTGGG CGGCGCGCTG
GGCGTGAACA CCTTCCTGAT GTACGGCTTC TTCAACACGA TCCCCACCTC GCTCGACGAG
GCGGCCAAGA TCGACGGGGC CACGCACACG CAGATCTACT GGACGATCAT CCTGCGGCTC
GTCGCCCCGA TCCTCGCCGT CGTCGGCCTG CTGAGCTTCA TCACCAGCTT CGGCGAGTAC
ATCATCGCGA GCCTCGTCCT TCAGGCCCAG GGCGAATGGA CCCTCGCGAT CGGGCTGTTC
AACATGGTCA GCGACCAGCT CAACGCGAAC TGGGGGACGT TCGCGGCGGG TGCGGTGATC
TCCGCGGTCC CCGTGCTCAT CCTGTTCCAG CTCCTGCAGA AGTACATCGT CGGCGGCCTG
ACGGCCGGCT CGGTCAAGGG CTGA
|
|---|
| Protein sequence | MASETVTSVD TQAIIEAERQ KLRSRMKPGR YMRELGWRHV IGLAAVIYAL FPIVFIISAS
LNPGGTMTGS NQLFSSIDLA NYTALNETRF WTWFGNSLFI SVTTAVGTVL MGAAAAYAFS
RFRFTGRRIG LTALLVIQMF PQMLAFVAVF LLVMLIGQVF PSLGFNSSIT LIAVYLGGAL
GVNTFLMYGF FNTIPTSLDE AAKIDGATHT QIYWTIILRL VAPILAVVGL LSFITSFGEY
IIASLVLQAQ GEWTLAIGLF NMVSDQLNAN WGTFAAGAVI SAVPVLILFQ LLQKYIVGGL
TAGSVKG
|
|---|
| |