| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2116 |
|---|
| Symbol | |
|---|
| ID | 8649647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 2271127 |
|---|
| End bp | 2272002 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003326692 |
|---|
| Protein GI | 269956903 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.378357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG TCACCGCCCC TGTCGACCGC ACCCTCCACC GCGGGTTCTC CTCCATCCGG
CCACGCGAGA TCGTGATCCG CTACGCCCTG CTGGTCCTGG TGCTCGTCCT CATGGTCGGC
CCGTTCCTGT GGCAGCTGTC GACATCGCTC AAGGGCCCGG CGGACGACAT CTACAGCACG
ACGCCGCAGC TCATCCCCGG CGACCCGACC TTCGCGAACT TCGTGGAGGC GGCGACGAAG
ATCCCGATCC TGCAGTTCGC CCTCAACTCG GTGCTCGTGG CGGTGCTCGT CGTCGGCGGC
AACGTCCTCG GTGCCACGCT GGCCGGATAC GCCCTCGCGC GGTTGCGCTT CCGGGGCCGG
GCGGTCGTCC TGGGGGCGAT CCTGGGGACG ATGCTGCTCC CGGCCGAGTC CACGATCGTG
GCGCAGTACC TGACCGTCCG ATCGATGGGC CTGTCGGACA ACCTCCTCGG CGTCGCCCTG
CCCGGGATGG TGGGCATGAT CAACATCCTG CTCATGCGCG CCGCCTTCAC GGCCGTCCCG
AAGGAGCTCG ACGAGGCCGC GCTGGTCGAT GGTGCCAACG TGTGGCAGCG GTTCTGGCGC
ATCGGCGTGC CGAACGTGCG GGGCATGATC GCGGTCGTCT CGGTCTTCGC GTTCATCGCC
GCGTGGGACG ACTTCCTGTG GCCGCTCATC GTGCTCACGA CACCCGACCG GTTCACGCTC
ACGGTCGGGC TGCAGTACCT GTCCGGCGCC TTCTCCTCGA ACCCCAGGGT GGTGGCCGCC
GGGACGATGA TCGCGTTCAT ACCGATCGTC ATCTTCTTCA TGGTCCTTCA GAAGCAGTTC
TTCAAGGGCG TGGACGCCGG CGCGATCAAG GGGTAG
|
|---|
| Protein sequence | MTTVTAPVDR TLHRGFSSIR PREIVIRYAL LVLVLVLMVG PFLWQLSTSL KGPADDIYST
TPQLIPGDPT FANFVEAATK IPILQFALNS VLVAVLVVGG NVLGATLAGY ALARLRFRGR
AVVLGAILGT MLLPAESTIV AQYLTVRSMG LSDNLLGVAL PGMVGMINIL LMRAAFTAVP
KELDEAALVD GANVWQRFWR IGVPNVRGMI AVVSVFAFIA AWDDFLWPLI VLTTPDRFTL
TVGLQYLSGA FSSNPRVVAA GTMIAFIPIV IFFMVLQKQF FKGVDAGAIK G
|
|---|
| |