| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2105 |
|---|
| Symbol | |
|---|
| ID | 8649636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 2260075 |
|---|
| End bp | 2260911 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_003326681 |
|---|
| Protein GI | 269956892 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.897892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGTGC TGCATCCCAC GGCCGCCCGG GCGCTGGAGG GCCTGCTGCA CGACGGCATG
ACTCTCGCGG TCGGCGGGTT CGGGCTGTGC GGCAACCCGA CGGACCTCAT CGAGGCGGTG
CGCGACTCCG GCGTGCGCGA CCTGACGGTG GTGTCGAACA ACATGGGCGT CGACGGCAAG
GGCCTGGGGC TCCTGCTGGA GAGCGACCAG GTGCGGCACG TGCTCGCCTC CTACGTCGGG
GAGAACGCGC TGTTCGCGCG CCGGTTCCTG GACGGCGACC TGGACGTCGA GTTCGTGCCG
CAGGGCACGC TGGCCGAGCG GCTGCGCGCG GGCGGAGCGG GCATCCCCGC GTTCTTCACC
GCGACGGGAG TGGGCACGCC GCTCGCCGAG GGCAAGCCGG TCCAGGAGCT CGACGGGCGC
CGCTACGTGC TGGAGCGCGC CATCGTGCCC GACCTCGCGC TGGTGCACGC GTACCGCGCG
GACCGGTTCG GCAACCTCGT CTACCGGCGC ACCGCCCGCA ACTTCAACCC GCTCGTCGCC
GCCGCCGGGC GGATCACCGT CGTCGAGGCG GAGCACCTCG ACGACGACCC GCTGGACCCG
GACGTCGTCG TCACCCCCGG CATCTACACG GACCGGCTGG TGCAGGCGCG CGAGCGCGTC
AAGGACATCG AGCAACGCAC CACCTCTCCG GTGGTTGAGC CGACCCCGGT GGTTGAGCCT
GTCGAAACCA CGCCCGCCGC TCCGCTGGTC GATCCCACTT CTCCGGTGGC CGATTCCACT
TCTCCGGTGG TTGAGCCTGT CGAAACCACG CCCCCCGACG CCGGAGCCCT CCGATGA
|
|---|
| Protein sequence | MTVLHPTAAR ALEGLLHDGM TLAVGGFGLC GNPTDLIEAV RDSGVRDLTV VSNNMGVDGK
GLGLLLESDQ VRHVLASYVG ENALFARRFL DGDLDVEFVP QGTLAERLRA GGAGIPAFFT
ATGVGTPLAE GKPVQELDGR RYVLERAIVP DLALVHAYRA DRFGNLVYRR TARNFNPLVA
AAGRITVVEA EHLDDDPLDP DVVVTPGIYT DRLVQARERV KDIEQRTTSP VVEPTPVVEP
VETTPAAPLV DPTSPVADST SPVVEPVETT PPDAGALR
|
|---|
| |