| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1998 |
|---|
| Symbol | |
|---|
| ID | 8649528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2155008 |
|---|
| End bp | 2156369 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_003326575 |
|---|
| Protein GI | 269956786 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0703806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCG CAGTCGACTC GCCGTCCGGC GCCCTGGCAC AGGACCTGGA CGGCTTCCGC
GCGCTGGTCG CGCTGCAGCA GCCCACGTGG CCCGACGCCG CGGCGCTCGC GGCGACGACG
GCCCGGCTCG GCCAGGCGGC ACCCCTGGTG CTCCCGGCCG AGGCGGACGG CCTGCGCGCC
AAGCTCGCCG CCGCGAGCCG TGGCGAGGCG TTCGTGCTCC AGGGCGGTGA CTGCGCGGAG
ATCTTCGCGG AGGCGAACGC GACCCGCATC CGCAACAAGA TCCGCACCAT CTTGCAGATG
GCCGTGATCC TCACCCACGG CGCCTCGATG CCCGTGGTGA AGATCGGTCG CCTGGCCGGC
CAGTACGCCA AGCCGCGCTC GTCCGACGAC GAGACCCGCG ACGGCGTGAC CCTGCCCGCC
TACCGCGGCG ACATGATCAA CGGCTTCGAG TTCACACCCG AGGCCCGCAC ACCGGACCCG
GCCCGCCTGG AGCAGGCGTA CCGGATCTCG GCCGCCACGG CCAACGTGGT CCGTGCCTTC
ACGCAGGGCG GCTACGCCGA CCTGCGGCAG GTCCACGAGT GGAACCGCGG CTTCATGCGC
AACCCCACGT ATGCGCGCTA CGAGCGCACC GCCGCCGAGA TCGACCGCGC CATCCGGTTC
ATGGAGGCGT GCGGCGCGGA CTTCGAGGCC CTGCGCAGCG TCGACCTGTA CCTGTCGCAC
GAGGCGCTCG TGCTCGACTA CGAACGCGCC CTCACCCGCG TCGACGCCCG CACCGGGCAC
GCCTACGACA CCAGCGCGCA CTTCCTGTGG ATCGGGGAGC GCACCCGCCA GCTCGGGGGA
GCGCACATCG AGTTCCTGTC CCGTGTCGCC AACCCGATCG GCGTCAAGCT CGGCCCGACG
ACGTCACCCG ACGACGCGTT GGCGCTCGCG GCGAGGCTCA ACCCGGAGAA CGCGCCCGGC
CGCCTGACGT TCGTGGCCCG GATGGGCGCC GGGAAGGTGC GCGACGTGCT GCCCGGCCTG
GTCGAGAAGG TCACGGCCGC CGGTGTGGCG GTCACCTGGA TGACCGATCC CATGCACGGC
AACACCATCA CGTCCGGCAC CGGCTACAAG ACCCGGCGCT TCGTCGACGT GCTCGACGAG
GTGCAGGGCT TCTTCGAGGT GCACCGTGCG GCGGGGACCG TCCCGGGCGG GTTGCACATG
GAGCTCACGG GCGACGACGT CACCGAGGTG CTGGGCGGGG CGGGGCAGAT CGACGAGGCC
GGCCTGGCCC GGCGGTACGA GACGCTGGTG GACCCGCGCC TCAACCACCA GCAGTCGCTG
GAGACGGCGT TCCTCGTCGC GGAGATGCTG CAGGCGCGCT GA
|
|---|
| Protein sequence | MSTAVDSPSG ALAQDLDGFR ALVALQQPTW PDAAALAATT ARLGQAAPLV LPAEADGLRA
KLAAASRGEA FVLQGGDCAE IFAEANATRI RNKIRTILQM AVILTHGASM PVVKIGRLAG
QYAKPRSSDD ETRDGVTLPA YRGDMINGFE FTPEARTPDP ARLEQAYRIS AATANVVRAF
TQGGYADLRQ VHEWNRGFMR NPTYARYERT AAEIDRAIRF MEACGADFEA LRSVDLYLSH
EALVLDYERA LTRVDARTGH AYDTSAHFLW IGERTRQLGG AHIEFLSRVA NPIGVKLGPT
TSPDDALALA ARLNPENAPG RLTFVARMGA GKVRDVLPGL VEKVTAAGVA VTWMTDPMHG
NTITSGTGYK TRRFVDVLDE VQGFFEVHRA AGTVPGGLHM ELTGDDVTEV LGGAGQIDEA
GLARRYETLV DPRLNHQQSL ETAFLVAEML QAR
|
|---|
| |