Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1984 |
Symbol | |
ID | 8649514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 2140207 |
End bp | 2141352 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003326561 |
Protein GI | 269956772 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGACG CCGACCTGCT CCGGGATCTG ACCCCGCAGG TCCTCGGCGT CCTCGTCCGC CGCGGAGCCG ACTTCGCGGC GGCCGAGGAC GCCGTCCAGG ACGCCCTGGT CGAGGCCGTC CGCCGCTGGC CCGACGCCGC TCCGGACGAT GCGAAGGGCT GGCTCGTCAC CGTGGCGTGG CGCAAGTTCC TCGACGCGCA CCGGGCGGCG TCGTCCCGGG CGCTGCGCGA GATCAAGGTC TCGCTCGAAC CGTCGCCCGG GCCGACCGAG CAGTCCGACG ACACGCTGCT GCTCCTGTCA CGGTGCTGCC ACCCCGCGCT GTCCCCGTCG TCGGCGGTGG CCCTGACGCT GCGCGCCGTG GGCGGGCTCA CCACGGCCCA GATCGCCCGG GCCTTCCTCG TTCCCGAGGC GACGATGGCG CAGCGCATCT CGCGTGCCAA ACGGACGCTG AGCGGTGCCA GGTTCGAGGA GCCCGGCGAC GTGCGGGCCG TGCTGCACGT GCTGTACCTG ATCTTCAACG AGGGGTTCAC GGGCGCGGTG GACCTCAGCG CCGAGGCCAT CCTGCTCACC CGTCAGCTCG TCGCCGCCGT GCCCGACGAC GCGGAGGCCG CCGGACTGCT CGCCCTCATG CTGCTGCACC ACGCGCGCCG GGGGGCGCGG TTCGACGACG CGGGCGCGAT CGTGGTGCTC GCCGACCAGG ACCGTTCGCG GTGGGACACG GCGCTGATCG CCGAGGGCGT CGCGCTGCTG CAGGGCGCGC TGGCGAGGGA TGCGCTGGGG GAGTACCAGG CGCAGGCCGC GATCGCCGCG TTGCACGACG ACGCCGCGAG CGCCGAGGAG ACCGACTGGC CGCAGATCCT CCAGTGGTAC GACGAGCTGG TCCGGCTGGC CCCGGGCAAC CCGGCCGTGG CCCTCAACCG TGCCGTCGCC GTCGGACACG TGGACGGGCC GCTCGCAGGG CTGCGGCTCG TCGAGGCGCT GGACGCCGCG CTCCCGCGAC GCGACGCCGT GGCTGCGTAC CTGCACGAGC GCGCGGGCAA CCGTGAGCGG GCCGCACGGC TCTACGTCGT CGCCGCGGAC GCCGCGCCCA GCGCCGCAGA ACGCGCCCAC CTGCTCAAGC AGGCCGCCCG CCTCGCCCCG CGCTGA
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Protein sequence | MIDADLLRDL TPQVLGVLVR RGADFAAAED AVQDALVEAV RRWPDAAPDD AKGWLVTVAW RKFLDAHRAA SSRALREIKV SLEPSPGPTE QSDDTLLLLS RCCHPALSPS SAVALTLRAV GGLTTAQIAR AFLVPEATMA QRISRAKRTL SGARFEEPGD VRAVLHVLYL IFNEGFTGAV DLSAEAILLT RQLVAAVPDD AEAAGLLALM LLHHARRGAR FDDAGAIVVL ADQDRSRWDT ALIAEGVALL QGALARDALG EYQAQAAIAA LHDDAASAEE TDWPQILQWY DELVRLAPGN PAVALNRAVA VGHVDGPLAG LRLVEALDAA LPRRDAVAAY LHERAGNRER AARLYVVAAD AAPSAAERAH LLKQAARLAP R
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