Gene Xcel_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1984 
Symbol 
ID8649514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp2140207 
End bp2141352 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content75% 
IMG OID 
Productputative RNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003326561 
Protein GI269956772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGACG CCGACCTGCT CCGGGATCTG ACCCCGCAGG TCCTCGGCGT CCTCGTCCGC 
CGCGGAGCCG ACTTCGCGGC GGCCGAGGAC GCCGTCCAGG ACGCCCTGGT CGAGGCCGTC
CGCCGCTGGC CCGACGCCGC TCCGGACGAT GCGAAGGGCT GGCTCGTCAC CGTGGCGTGG
CGCAAGTTCC TCGACGCGCA CCGGGCGGCG TCGTCCCGGG CGCTGCGCGA GATCAAGGTC
TCGCTCGAAC CGTCGCCCGG GCCGACCGAG CAGTCCGACG ACACGCTGCT GCTCCTGTCA
CGGTGCTGCC ACCCCGCGCT GTCCCCGTCG TCGGCGGTGG CCCTGACGCT GCGCGCCGTG
GGCGGGCTCA CCACGGCCCA GATCGCCCGG GCCTTCCTCG TTCCCGAGGC GACGATGGCG
CAGCGCATCT CGCGTGCCAA ACGGACGCTG AGCGGTGCCA GGTTCGAGGA GCCCGGCGAC
GTGCGGGCCG TGCTGCACGT GCTGTACCTG ATCTTCAACG AGGGGTTCAC GGGCGCGGTG
GACCTCAGCG CCGAGGCCAT CCTGCTCACC CGTCAGCTCG TCGCCGCCGT GCCCGACGAC
GCGGAGGCCG CCGGACTGCT CGCCCTCATG CTGCTGCACC ACGCGCGCCG GGGGGCGCGG
TTCGACGACG CGGGCGCGAT CGTGGTGCTC GCCGACCAGG ACCGTTCGCG GTGGGACACG
GCGCTGATCG CCGAGGGCGT CGCGCTGCTG CAGGGCGCGC TGGCGAGGGA TGCGCTGGGG
GAGTACCAGG CGCAGGCCGC GATCGCCGCG TTGCACGACG ACGCCGCGAG CGCCGAGGAG
ACCGACTGGC CGCAGATCCT CCAGTGGTAC GACGAGCTGG TCCGGCTGGC CCCGGGCAAC
CCGGCCGTGG CCCTCAACCG TGCCGTCGCC GTCGGACACG TGGACGGGCC GCTCGCAGGG
CTGCGGCTCG TCGAGGCGCT GGACGCCGCG CTCCCGCGAC GCGACGCCGT GGCTGCGTAC
CTGCACGAGC GCGCGGGCAA CCGTGAGCGG GCCGCACGGC TCTACGTCGT CGCCGCGGAC
GCCGCGCCCA GCGCCGCAGA ACGCGCCCAC CTGCTCAAGC AGGCCGCCCG CCTCGCCCCG
CGCTGA
 
Protein sequence
MIDADLLRDL TPQVLGVLVR RGADFAAAED AVQDALVEAV RRWPDAAPDD AKGWLVTVAW 
RKFLDAHRAA SSRALREIKV SLEPSPGPTE QSDDTLLLLS RCCHPALSPS SAVALTLRAV
GGLTTAQIAR AFLVPEATMA QRISRAKRTL SGARFEEPGD VRAVLHVLYL IFNEGFTGAV
DLSAEAILLT RQLVAAVPDD AEAAGLLALM LLHHARRGAR FDDAGAIVVL ADQDRSRWDT
ALIAEGVALL QGALARDALG EYQAQAAIAA LHDDAASAEE TDWPQILQWY DELVRLAPGN
PAVALNRAVA VGHVDGPLAG LRLVEALDAA LPRRDAVAAY LHERAGNRER AARLYVVAAD
AAPSAAERAH LLKQAARLAP R