| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1898 |
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| Symbol | |
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| ID | 8649428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylanimonas cellulosilytica DSM 15894 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013530 |
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| Strand | - |
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| Start bp | 2044263 |
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| End bp | 2046143 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | deoxyxylulose-5-phosphate synthase |
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| Protein accession | YP_003326475 |
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| Protein GI | 269956686 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.856078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCTGT TGGCCGGCAT CTCGTCGCCC GCCGACCTGC GGCGGCTGAA GCCCCAGCAG
CTCCCGGCGC TCGCGGCGGA GATCCGCGAC TTCCTGGTGC ACAACGTCTC CCGCACCGGC
GGGCACCTGG GACCGAACCT CGGCGTCGTC GAGCTGACCC TCGCTCTGCA CCGCGTGTTC
GAGTCGCCGA AGGACACCTT CGTCTTCGAC ACCGGGCACC AGTCCTACGT GCACAAGCTG
CTCACGGGCC GCCAGGACTT CTCGGCGCTG CGCAAGCAGG GCGGGCTGTC CGGCTACCCC
TCGCGCACCG AGTCGGAGCA CGACGTCGTC GAGAACTCCC ACGCCTCCAC GGCGCTGAGC
TGGGCCGACG GCATCGCCAG GGCGAACCAG GTGCGCGGGT TCGACGACCG GCACGTCATC
GCCGTCATCG GCGACGGCGC ACTCACCGGC GGCATGGCCT GGGAGGCGCT CAACAACATC
GCCGAGTCCG AGGACCGGCG CGTGATCATC GTCGTCAACG ACAACGGGCG CTCCTACTCG
CCGACCATCG GCGGCCTCGC CCACCACCTC GACACGCTGC GCACCACGCG CGGGTACGAG
CAGTTCCTCG GGTGGGGCAA GCGGACGCTG AGCCGTTCCG GGGCGCCCGG GCGCTTCGCG
TTCCAGGCGC TGCACGGCCT GAAGAAGGGC CTCAAGGACG TCGTCATGCC GCAGGGCATG
TTCGAGGACC TCGGCATCAA ATACATCGGC CCCGTCGACG GCCACGACGA GGCCGCCATG
GAGCGCGCGC TGCAGCGCGC CCGCGACTTC GGCGCGCCCG TCATCGTGCA CGCCATCACC
GAGAAGGGCC GCGGCTACAC CCCCGCCGAG CAGGACGTCG CCGACCGCTT CCACGCCGTC
GGGCGCATCC ACCCCGAGAC GGGTCTGCCC GTCGCGCCGT CGCGGTTCGG CTGGACGTCG
GTGTTCGCCG ACGAGATCGT GCGCATCGGA CGCCGCCGTC CCGACGTCGT CGCCATCACC
GCCGCGATGC TGCACCCGGT GGGCCTCGCG CCGTTCGCGG CCGAGTTCCC CGAGCGCACC
TTCGACGTCG GGATCGCGGA GCAGCACGCC GCCACCTCGG CCGCCGGCAT GGCCTTCGCA
GGGCTGCACC CCGTCGTCGC CGTCTACGCC ACGTTCCTCA ACCGGGCGTT CGACCAGGTG
CTCATGGACG TCGCGCTGCA CAAGGCCGGC GTCACCTTCG TGCTCGACCG GGCCGGTCTC
ACCGGCGACG ACGGCGCCTC CCACAACGGC ATGTGGGACA TGGCCATGCT GCGCATCGTC
CCCGGCCTGC GGCTGGCCGC CCCGCGCGAC GAACCGACGC TGCGGGCCGC CCTGCGCACG
GCGGTCGACG TCGACGACGC GCCCACCGTC GTGCGGTACC CCAAGGGCGC GCTCGTCGAC
GACATCCCGG CGGTCACCGA GCTCGACGGC GTCGACGTCA TCGCGCGGCA CGAGGGACCG
GACGGCGCAC GGCGCGTGCT CGTCGTCGGC ATCGGGTCCA TGGCCGGGAC CGCGCTGGCC
ACGGGCGAGG CCTTGGCCGC CCACGGGCTC GCGGTGACCG TCGCCTCCCC GACGTGGGTG
CTGCCCGTGC CCGCCGCGCT GGTCAAGCTC GCGGGCGAGG CGGACCTCGT GGTCACGCTC
GAGGACGGCG TCGTCGACGG CGGGATCGGC TCGATGCTCG CCCAGCGCTC CGCCGAGCAG
GGCATCACCA CCCCGCAGGT GCACCGGGGC ATCCCGCTGC AGTTCCTCGA CCATGCCACC
CGCGACCAGA TCGCCGCGGC CACCCGCCTC ACGGCGGCGG ACGCCACCCG CGACGCCCTC
GCGGCCCTCA CTCCCCGCTG A
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| Protein sequence | MGLLAGISSP ADLRRLKPQQ LPALAAEIRD FLVHNVSRTG GHLGPNLGVV ELTLALHRVF
ESPKDTFVFD TGHQSYVHKL LTGRQDFSAL RKQGGLSGYP SRTESEHDVV ENSHASTALS
WADGIARANQ VRGFDDRHVI AVIGDGALTG GMAWEALNNI AESEDRRVII VVNDNGRSYS
PTIGGLAHHL DTLRTTRGYE QFLGWGKRTL SRSGAPGRFA FQALHGLKKG LKDVVMPQGM
FEDLGIKYIG PVDGHDEAAM ERALQRARDF GAPVIVHAIT EKGRGYTPAE QDVADRFHAV
GRIHPETGLP VAPSRFGWTS VFADEIVRIG RRRPDVVAIT AAMLHPVGLA PFAAEFPERT
FDVGIAEQHA ATSAAGMAFA GLHPVVAVYA TFLNRAFDQV LMDVALHKAG VTFVLDRAGL
TGDDGASHNG MWDMAMLRIV PGLRLAAPRD EPTLRAALRT AVDVDDAPTV VRYPKGALVD
DIPAVTELDG VDVIARHEGP DGARRVLVVG IGSMAGTALA TGEALAAHGL AVTVASPTWV
LPVPAALVKL AGEADLVVTL EDGVVDGGIG SMLAQRSAEQ GITTPQVHRG IPLQFLDHAT
RDQIAAATRL TAADATRDAL AALTPR
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