| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1894 |
|---|
| Symbol | |
|---|
| ID | 8649424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2038380 |
|---|
| End bp | 2039384 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | pyruvate formate-lyase activating enzyme |
|---|
| Protein accession | YP_003326471 |
|---|
| Protein GI | 269956682 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.703525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCA CCAGCCCCGC GGCCGACGTC ACCACCCTTC CCCTCGGTGG TGGCGCCGGC
CGCGGTGTCC AGGAGACGGA CGGCCGCAGC CTCGGCACCG TCGTGCACGG CGAGCTCATC
TCGGAGGGCC TCGACGTCCC CACGGCGCCC CCGCGCCGCA CCGGCGCCGG GCTGGCGGGC
CTCGAGGTCT CGCACCTCGA CCGCAGCGAG AAGTTCGCCA TGATGCGCGC CGGCGAGCTC
GGCTCGGTGC ACTCCTGGGA GCTCGTCACC GCCGTCGACG GTCCGGGCAC GCGCATGACG
GTGTTCCTCA ACGGGTGCCC GCTGCGCTGC CTGTACTGCC ACAACCCCGA CACCCTGGAG
ATGAAGGACG GCGAGCCGGT CACGGCCGAC CAGCTGCTCA CCCGCATCAA GCGGTACGTG
CCGGCGTTCA CGGCCACGCA GGGCGGGCTG ACGATCTCCG GCGGCGAGGT GCTCCAGCAG
CCCGCGTTCG CGGCCCGCCT CCTGCGCGGG GCCAAGGAGA TGGGCGTGCA CACGGCCATC
GACACCTCGG GCTTCCTCGG GGCGGCGATG ACGGACGAGA TGATCGCGGA CACCGACCTG
GTGCTCCTCG ACATCAAGTC GGGCGACCCG GACATCTATC GCCGGGTCAC CAAGCGTGAG
CTGCAGCCCA CGCTCGACTT CGGGCGGCGC CTGGCGCGGT CCGGTCTCAA GGGTGGCGTG
GACCCCGACG ACCCGGTCGA GGTGTGGTTG CGGTTCGTGC TCGTGCCCGG CCTGACCGAC
GACGTCCGCA ACGTCGACCT GGTGGCGGAC TACGCGGCGG AGCTCAACCA GATCCGCCCC
GGCACGGTGA CCCGGGTGGA GGTGCTGGCG TTCCACAACA TGGGCGTCGA CAAGTGGGAG
ACCCTGGGCC GCGAGTACGA GCTCAAGAAC ACCCCGCCGC CCACCCCCGA GCTCCTCGAA
CGGGTGCGCG AACAGTTCCG TTCGCGCGGG CTGACCACCT ACTAA
|
|---|
| Protein sequence | MSSTSPAADV TTLPLGGGAG RGVQETDGRS LGTVVHGELI SEGLDVPTAP PRRTGAGLAG
LEVSHLDRSE KFAMMRAGEL GSVHSWELVT AVDGPGTRMT VFLNGCPLRC LYCHNPDTLE
MKDGEPVTAD QLLTRIKRYV PAFTATQGGL TISGGEVLQQ PAFAARLLRG AKEMGVHTAI
DTSGFLGAAM TDEMIADTDL VLLDIKSGDP DIYRRVTKRE LQPTLDFGRR LARSGLKGGV
DPDDPVEVWL RFVLVPGLTD DVRNVDLVAD YAAELNQIRP GTVTRVEVLA FHNMGVDKWE
TLGREYELKN TPPPTPELLE RVREQFRSRG LTTY
|
|---|
| |