| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1884 |
|---|
| Symbol | |
|---|
| ID | 8649414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 2026392 |
|---|
| End bp | 2027228 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | bifunctional deaminase-reductase domain protein |
|---|
| Protein accession | YP_003326461 |
|---|
| Protein GI | 269956672 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.545183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCTGC CCACGCTGAA CCTGATCGTC CCGGCGTCGA GGATCGTCCC GCCCGACGAC
GGCGAGGCGG ACCTGGTGGC CCTCTACGAG CATGCGCCGG GGGCGCTCCG GGCCAACATG
ATCGCCACCG TGGACGGTGG GGCGTGGGGA CCGGACCACG TCTCAGGGTC GATCAACGAC
GACGCCGACT GGCGGGTGTT CCGGGTGCAA CGGGCGCTGG CCGACGTCGT CGTCGTGGGT
GCCGGGACGG CCCGGGCGGA GCAGTACACG CAGCTCGGCC GCCCGGACGG GCTGGCGCAC
CTGCGTGCGG CACCGCTGGA GCTTGCGCTC GTCACGCGCA GCGGGGACGT GCCGCCGCTG
CTGGTCCAGG CGGACCGGCT GCCGTACGTG ATCACGGGGG CGCGGGGCGC GGCCGCGGCG
CAGGCGGCGC TGCCCGCGGA CCGGGTGATC GTGGTGCCCG CGACGGGCCG GGACGGCGAC
GGCGGTGACG AGGACCGTGA CGTCGACCGC GGGGACGTCG ATCTTGCCGC GGGGCTGTCG
GCGTTGGCCG CGCTCGGGCT GCGGCGGGTG CTGTGCGAGG GCGGCCCGCA CCTGCTGGCG
GACCTGCTGG CGGCGGGCCT GGTCGACGAG CTCTGCGTCA CGACCTCCCC GCGGCTGGTC
GGCCCTGGCC CCAGCCGGAT CGTTGCCGGC GAAGGTCCGG CGAGCGGCGC GTCGGCGGCG
CCGGCGGGTG CCCGGCTCGC CCACCTGCTG CACGAGCCTG CCGCGGGCAC GCTGCTGGCG
CGCTGGCTCC TGCGGGCCGG CGATGACGGG TCGGCGACGG GTGAGGCCGG CGGTTGA
|
|---|
| Protein sequence | MVLPTLNLIV PASRIVPPDD GEADLVALYE HAPGALRANM IATVDGGAWG PDHVSGSIND
DADWRVFRVQ RALADVVVVG AGTARAEQYT QLGRPDGLAH LRAAPLELAL VTRSGDVPPL
LVQADRLPYV ITGARGAAAA QAALPADRVI VVPATGRDGD GGDEDRDVDR GDVDLAAGLS
ALAALGLRRV LCEGGPHLLA DLLAAGLVDE LCVTTSPRLV GPGPSRIVAG EGPASGASAA
PAGARLAHLL HEPAAGTLLA RWLLRAGDDG SATGEAGG
|
|---|
| |