| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1882 |
|---|
| Symbol | |
|---|
| ID | 8649412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 2024308 |
|---|
| End bp | 2025219 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF344 |
|---|
| Protein accession | YP_003326459 |
|---|
| Protein GI | 269956670 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.849579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGAC GGCACAGCAA GCACGACCTG GAGACCACGC CCGACGACAA GCTGCTGCGC
AAGCTCGAGG CGAAGTGGGA GGACTCCCCC ACCCGGGTCC TGCGCTGGCA CAAGGGCCTC
GACGTCCGCG GGCTCGACTG CAACTCCGCG CCCGGCTGGG ACGGGGACAA GGACGACGGC
GGGGCGCTCG TCGCCGCGCA CGCCGAGGAG CTCAGCGAGC TCCAGGAACG GCTGTTCGCG
GACGGTCGCT CCGGGGGCAG CCGGTCGGTG CTGCTGGTCC TGCAGGGCCT CGACACGTCC
GGCAAGGGCG GCATCGTGCG GCACGTCGTC GGGCTCGTGG ACCCGCAGGG AGTGCAGCAC
CGCGCGTTCG GCGTGCCCAC CGCGGAGGAG GCGTCCCACG GCTACCTGTG GCGCATCCGC
AACGCCCTGC CCCGGCCCGG GTACATCGGC GTGTTCGACC GGTCCCACTA CGAGCAGGTG
CTCGTGGTCC GCGTCGAAGG GCTCGAACCG GAGGAGACGT GGCGGGCCCA CTACGACGAG
ATCAACGCCT TCGAGGCCGA GGTCGCCGCC GCGGGCACCA CGATCGTCAA GGTCGCGCTG
ATCGTGTCCA AGGACGAGCA GAAGGCACGC CTGACCGAGC GGCTCGAACG GCCCGACAAG
TACTGGAAGT ACAACCCCGG CGACCTGACG ACGCGCGCCC GGTTCGGCGA CTACCTCGAC
GCCTACCAGG AGCTGTTCGA GAAGACCTCG ACCGACGTCG CCCCGTGGCA CGTGGTGCCC
GCCGACAAGA AGTGGTACTC ACGCCTCGCC GTCACCGAGC TGCTGCTGGG CGCGCTGCGC
TCCCTCGACC TGGGCTGGCC GCCTGCCGAC TTCGACGTCG AGGAGCAGCA GCGCCTGCTC
GCGGAAACCT GA
|
|---|
| Protein sequence | MSGRHSKHDL ETTPDDKLLR KLEAKWEDSP TRVLRWHKGL DVRGLDCNSA PGWDGDKDDG
GALVAAHAEE LSELQERLFA DGRSGGSRSV LLVLQGLDTS GKGGIVRHVV GLVDPQGVQH
RAFGVPTAEE ASHGYLWRIR NALPRPGYIG VFDRSHYEQV LVVRVEGLEP EETWRAHYDE
INAFEAEVAA AGTTIVKVAL IVSKDEQKAR LTERLERPDK YWKYNPGDLT TRARFGDYLD
AYQELFEKTS TDVAPWHVVP ADKKWYSRLA VTELLLGALR SLDLGWPPAD FDVEEQQRLL
AET
|
|---|
| |