Gene Xcel_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1840 
Symbol 
ID8649364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1986220 
End bp1988550 
Gene Length2331 bp 
Protein Length776 aa 
Translation table11 
GC content76% 
IMG OID 
Product5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 
Protein accessionYP_003326418 
Protein GI269956629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCCA CCCCTGCCTT CCCCGGCGGC ACCATCCTCG GCTACCCCCG CATCGGGCGG 
CGCCGTGAGC TCAAGCGCGC CCTCGAGGCC CACTGGTCCG GGCGCACCAG CGCCGCCGAG
CTGGCCGAGA CGCTCGCCGC GCTGCGTCTG GCCACCGCGC GGCACCTGGT CGCGCTCGGC
CTCGACGCCG GCGACGGGTC CGTCCCCGGC TCCTTCTCGC CCTACGACCA CGTGCTCGAC
GCCGCCGTGC TGCTCGGCAT CGAGCCCGCC GACCGGTACT TCGCCGCCGC CCGCGGCGAC
GCCACCCGGC CGCCGCTGGA GATGACCAAG TGGTTCGACA CCAACTACCA CTACCTCGTC
CCCGAGATCG GGCCCGGCAC CCCCGTCTCG TTCGCCGACG ACGCCCCCGT GCGCTGGTTC
ACCGAGGCTG CCCAGCCCGC CGACGGCGGC GCCCCCGTCG TCACCCGCCC CGTCGTCGTC
GGACCGGTCA CCTTCCTGCT GCTCGCCACG GCCGCGCCCG GCGCCCCCGA GGGCTTCCGT
CCGCTCGACC GGCTCGACGA CGTCGTCACC GCCTACGGCG AGCTGCTCGC CGCGCTCGGC
GCGGCCGGGG CACCGTGGGT CCAGCTCGAC GAGCCCGCCC TCGTCGCCGA CACCGCCACC
GCCGGGCTGG CACCGGGCGA GCTCGCCGCC GCCGTCGAGC GCGCCTACGG ATCGCTCACC
GCCGTCGCAG GGCGGCCGCA GATCCTCGTC GCGGCACCCT ACGGGGACCT GCGCACCGGG
GACGACGACC TGCTCGCCGT GCTCGCCGCC TCCGACGTCG AGGCGATCGC CGTCGACCTC
GTCCGCGGCG AGGCCCCGAG CCGCCCCGTC CCGGGCCTGG CGACCACCAC CCTGGTCGCC
GGCCTGATCG ACGGCCACAA CATCTGGCGC GCCGACCTCG CCGCACACCT CGACCAGGCC
GCCGCCCTCG CCGCCACCAC GGGCGCCGGA GCCGTCACCG TCGGCACCTC GACGTCCCTG
CTCCACGTGC CCCACGACGT CGACGACGAG ACCTGGGACG GCACCGACGG CCGCGACCCC
CGACTGGCCG CCTGGCTCGC CTTCGCCGAC CAGAAGGTCA CCGAGGTCGT CACCCTCGCG
AACGGCCTGC GCCACGGGGC CGACGCCGTC GGCGCTCAGC TCGCCGCGGC GTCGGCGGCG
CTCGCGGACC GGGCGGCGGC CGCCGGCGTC GTCGTCCCCG CCGTGCGTGA CCGGGCCGCT
GCGCTCGGTG ACGACGACGC GACCCGCGCC CCGTACGCCG AGCGGGCCGC CGCGCAGGCG
GACCGGCTGC GGCTGCCGGC GTTGCCCACG ACGACCATCG GCTCGTTCCC GCAGACGCCG
CAGATCCGCG CGGCCCGCAA CGCCTGGGCG CGGGGCGCCG CCACGGACGC CGAGTACCGG
ACCGCGATGC GCGACGAGAT CGCGGCCGTC ATCACGCTCC AGGAGGAGCT CGGCCTCGAC
GTCCTGGTGC ACGGCGAGCC CGAGCGCAAC GACATGGTGC AGTACTTCGC CGAGCAGCTC
GACGGGTTCG CCGTCACGGC GGGCGGCTGG GTGCAGTCGT ACGGCTCGCG CTGCGTGCGC
CCGCCGATCC TGTGGGGCGA CGTCTCCCGC CCGGCCCCGA TGACCGTCGA GTGGACCAGC
TACGCGCAGT CGCTCACCAC GCGTCCGGTC AAGGGCATGC TCACGGGCCC CGTGACGATC
CTCGCGTGGT CGTTCGTGCG GGACGACCTA CCGCTCGCCG ACGTCGCCGC GCAGGTGGCG
CTCGCGCTGC GCGACGAGGT CGGCGACCTG ACGGCCGCGG GCACCGCCGT CGTGCAGGTG
GACGAGCCCG CCCTGCGCGA GCTGCTGCCG CTGCGGCGGG CCGACCAGCC CGCCTACCTG
GCGTGGTCGG TGCGGGCCTT CCGGGTCGCG ACCGGCGGTG CGGGGCCGGA CGTCCAGGTG
CACACCCACC TGTGCTACTC CGACTTCGGT GAGGTCATCG ACGCGATCGA CGGGCTCGAC
GCCGACGTCA CCTCGCTGGA GGCGGCCCGC TCGCGCATGG AGATCGTGCC GGAGCTGCAC
GAGGCGGGCT ACGCCCGCGG CATCGGGCCG GGCGTCTGGG ACATCCACTC GCCGCGCGTG
CCGACGACGG CGGAGGTCAC CGAGCAGCTC ACCCTCGCGG TGCGGGCCGT GGACCCGGCG
CTGGTGTGGG CCAACCCGGA CTGCGGGCTG AAGACGCGCG GCTACGAGGA GACGACGGCG
TCGCTGCGCA ACCTGGTCGC CGCTGCCCAC GCGGTCCGGG CCACCCTCTG A
 
Protein sequence
MPSTPAFPGG TILGYPRIGR RRELKRALEA HWSGRTSAAE LAETLAALRL ATARHLVALG 
LDAGDGSVPG SFSPYDHVLD AAVLLGIEPA DRYFAAARGD ATRPPLEMTK WFDTNYHYLV
PEIGPGTPVS FADDAPVRWF TEAAQPADGG APVVTRPVVV GPVTFLLLAT AAPGAPEGFR
PLDRLDDVVT AYGELLAALG AAGAPWVQLD EPALVADTAT AGLAPGELAA AVERAYGSLT
AVAGRPQILV AAPYGDLRTG DDDLLAVLAA SDVEAIAVDL VRGEAPSRPV PGLATTTLVA
GLIDGHNIWR ADLAAHLDQA AALAATTGAG AVTVGTSTSL LHVPHDVDDE TWDGTDGRDP
RLAAWLAFAD QKVTEVVTLA NGLRHGADAV GAQLAAASAA LADRAAAAGV VVPAVRDRAA
ALGDDDATRA PYAERAAAQA DRLRLPALPT TTIGSFPQTP QIRAARNAWA RGAATDAEYR
TAMRDEIAAV ITLQEELGLD VLVHGEPERN DMVQYFAEQL DGFAVTAGGW VQSYGSRCVR
PPILWGDVSR PAPMTVEWTS YAQSLTTRPV KGMLTGPVTI LAWSFVRDDL PLADVAAQVA
LALRDEVGDL TAAGTAVVQV DEPALRELLP LRRADQPAYL AWSVRAFRVA TGGAGPDVQV
HTHLCYSDFG EVIDAIDGLD ADVTSLEAAR SRMEIVPELH EAGYARGIGP GVWDIHSPRV
PTTAEVTEQL TLAVRAVDPA LVWANPDCGL KTRGYEETTA SLRNLVAAAH AVRATL