Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1822 |
Symbol | |
ID | 8649346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 1963806 |
End bp | 1965128 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003326400 |
Protein GI | 269956611 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.679534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGTGC AGACCACGCC GACGACGACC GCCACCACCC CTGCCGCCGC GCGGCGCGGC GGACGGTGGA TCGAGCACTG GAACCCCGAA GACCCCACCT TCTGGGCCGA CGGCGGACGC CGCGTCGCCC GCCGCAACCT GGGCGTCTCG ATCTTCGCCG AGCTGCTCGG GTTCTCCGTG TGGGCCCTGT GGTCGATCGT CGTGCCGCAG CTCCCCGCCG CCGGCTTCAC GCTCACCGCC GACCAGATGT TCTGGCTGAT CGCCGTGCCC TCCCTGGTCG GCGCCTTCCT GCGCCTGCCC TACACGCTCG CCGTACCGCT GTTCGGCGGG CGCAACTGGA CCATCGTCTC CGCGCTCCTG CTGCTCGTGC CGACGACGGC GCTCGCCGTC GTCGTGCACC ACCCGGGGAC CTCCTTCGAG GTGCTGCTGG CGGTGGCGGC GCTCGCGGGC CTGGGCGGCG GCAACTTCGC CTCGTCGATG GCGAACATCT CCTTCTTCTT CCCCGCCCGT GAGAAGGGGG CCGCGCTCGG CTGGAACGCC GCCGGTGGCA ACCTCGGCAC GGCCGCGGTG CAGCTCGCGG TGCCGCTGGT CATCGTGGCC GGCGGCGGCC TCGCGCTGGA CCGGGCCGGG CTGATGTTCA TCCCGCTGGT GCTGCTGGCC GCGGTGCTCG CATGGCGGTG GATGGACAAC CTGACCACCG CGAAGTCGGA CCCGCGCACC TTCGCCGTGG CGGCCCGGCT GCCGCACACG TGGATCATCT CGGCGATCTA CATCGGCACC TTCGGGTCCT TCATCGGCTA CTCCGCCGTC TTTCCGACAC TGCTGGCCGG TGTCTTCCCG GGCGTGAGCC TCCAGGTCGC CTTCCTCGGG GCGCTGGTGG GATCGCTGGC CCGCCCGCTG GGCGGCATCC TGGCCGACCG GCTCGGTGGC GCCCGCATCA CCGTCGCCGC CTTCGGCGTG ATGATCGCCG GTGCGCTCGG CGCCGTCGCC GCCCTGCGGC AGCACGACTT CGGGCTGTTC CTCGGCTCGT TCCTGGTCCT GTTCGTCGCC ACCGGCATCG GCAACGGGTC CGTGTACCGG ATGATCCCGG CGGTGTTCCG CGAGACGGGC GCCAGTGCAG GGGCGGCCGC CGGGTGCATC GGCATCGCGG GCGCCGTCGG CGCCGTCGGC GGCTTCCTGG TGCCGCGCGG CTTCGCGATC TCGACGACGG CGACGGGGTC GCTGATCCCC GCCCTGCTGG TGTTCGTCGG GGTGTACGTG GCGCTCGCGG CCCTCACCGC CGGGGTGTAC GCCCGGGGCC GGATGGGCGC GGTGCGCGTG TGA
|
Protein sequence | MAVQTTPTTT ATTPAAARRG GRWIEHWNPE DPTFWADGGR RVARRNLGVS IFAELLGFSV WALWSIVVPQ LPAAGFTLTA DQMFWLIAVP SLVGAFLRLP YTLAVPLFGG RNWTIVSALL LLVPTTALAV VVHHPGTSFE VLLAVAALAG LGGGNFASSM ANISFFFPAR EKGAALGWNA AGGNLGTAAV QLAVPLVIVA GGGLALDRAG LMFIPLVLLA AVLAWRWMDN LTTAKSDPRT FAVAARLPHT WIISAIYIGT FGSFIGYSAV FPTLLAGVFP GVSLQVAFLG ALVGSLARPL GGILADRLGG ARITVAAFGV MIAGALGAVA ALRQHDFGLF LGSFLVLFVA TGIGNGSVYR MIPAVFRETG ASAGAAAGCI GIAGAVGAVG GFLVPRGFAI STTATGSLIP ALLVFVGVYV ALAALTAGVY ARGRMGAVRV
|
| |