Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1806 |
Symbol | |
ID | 8649330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 1945288 |
End bp | 1947240 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003326384 |
Protein GI | 269956595 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0745976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCCGA TGCCCACCGA CGCCATGCCC ACCGACGCGA CGCCCACCCC TCCTCAGCCG CCCACCGCCC CACGGCGGGC CGAGCTCGCG ACGATCCCGG CGCTGCTGCG GCTGCTGCCC TTCGTGCGGC CCGCGCTGCC CCGGCTGATC GCCGGCCTGT TCTCCGCGCT CGGCGCCTCG CTCGCCGCGC TGGCGATCCC CCGCGTGCTG CAGGTGATCG TCGACGGCCC GCTCGCCGAG GGCGCCCGCA CGGGGGACAC CGGCGCCCTG TGGGGTGCGG TCGCCCTCGT GCTCGGCCTC GGCCTGGCGG AGGCCGGCCT GATCCTCGCC CGCCGCACCC TCGTGATGCT GCCCGCCAAC CGGGTCGAGG CCGACCTGCG CATGACGCTG TTCCGGCACC TGCAGGACCT GCCGATCGCG TTCCACGACC GCTGGTCCGG CGGGCAGCTG CTGTCCCGCT CCATGTCCGA CCTCGGCCTG CTGCGCCGCT TCCTGGTGTT CGGGCAGATC CAGCTCGTCG TGTCCTGCGT GACCGTCGTC GTCGGCATCG GGCTGCTGGC CGCGACCACC GGCTGGCTCG GCCTCGTCTA CCTCGCCGGC GCCGTACCGG TGAGCGTGAT CGCGTTCCGG TTCGCGCGCC GCTACCGGGT CGTGTCCCGC CGCGCCCAGG ACCAGGCCGG AGACCTGGCC ACCACGGTCG AGGAGTCCGT GCACGGCATC CGCGTGCTCA AGGCGTTCGG CCGCGGCCGC GACGCACTGG CGTCCTTCAC CGGGCAGGCC GAACGGCTGC GCACCACCGA GCTCGCCAAA GCACGCTCCC AGGCGACCGT CAACGTCGCG CTCACCGCGA TCCCCGAGCT CACCCTCGCC GCCTGCCTCG TGCTCGGCGC CCTCATGGTC CACCAGGGAA CCCTGACCAT CGGGGCCCTG ACCGCCTTCT TCGCCACCGT CGCCGTCATG AGCGCCCCCG TCGTCGACCT CGGCATGACC CTGTCGATGA CCCTCAACGC CCGCACCGCC GTCGACCGCT ACTTCGATGT GCTCACCACC ACCAACCCGC TCACCGACCC CGTCGACCCC GTCGACCCCC CCGAACCCCA CGGCCACGTC CGCCTGAGGG ACGTCACCTT CCGGTACGAC GACGCGACCC GCCCCGTCCT GGACCGCGTC GACCTCGACC TGCCGGCCGG CACCACCACC GCCCTCGTCG GCCTCACCGG ATCCGGCAAG TCCACCCTCG CGATGCTGAT CCCACGCCTG TACGACGTCA CCGGGGGCGC CGTCGAGCTC GACGGCGTCG ACGTGCGCCG CCTGCGCCGC ACCGACGTCC GCCGCACCGT GGCCGTCGCG TTCGAGGACC CCACCCTGTT CTCCGCCTCC GTCCGCGACA ACGTGCTGCT CGGCGTCGAC GACACCCTGC CCGGCGCCCG CAAGGACGAG CTGCTCGCCG AGGCCCTCGA CGTCGCCCAG GCCCAGTTCA CCGGCCACCT GCCTCACGGC GTCGACACCC GCATCGGGGA AGAGGGCCTG TCCCTGTCCG GCGGGCAACG CCAACGCCTC GCCCTGGCAC GCGCCATCGC CGCCCGCCCC CGCGTCCTCG TGCTCGACGA CCCCCTGTCC GCCCTCGACG TCGCCACCGA GGAACGCGTC ACCGCGCGCC TGCGCGAGGT CCTGCACGAC ACCACCACCC TCGTCATCGC GCACCGGCCC TCCACGGTGG CGCTCGCGGA CCGGGTCGCC GTCCTCCAGG ACGGCCGCAT CACCGCCGTG GGCACCCACA CCGAGCTGCT CGCCACCGAT CCCCACTACC GGTACGTCAT CTCCTCCCTC GAGGACGACG CCGCCGAGCA CGGCATCGGC ACCGTGCCCG ATCCCGACCC CGTGCCCGTC CTGCCACCCG ACGGCGGCGG ACCCGACGAG CTCGGCACCG ACGCGACGGG AGCACGCCTG TGA
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Protein sequence | MSPMPTDAMP TDATPTPPQP PTAPRRAELA TIPALLRLLP FVRPALPRLI AGLFSALGAS LAALAIPRVL QVIVDGPLAE GARTGDTGAL WGAVALVLGL GLAEAGLILA RRTLVMLPAN RVEADLRMTL FRHLQDLPIA FHDRWSGGQL LSRSMSDLGL LRRFLVFGQI QLVVSCVTVV VGIGLLAATT GWLGLVYLAG AVPVSVIAFR FARRYRVVSR RAQDQAGDLA TTVEESVHGI RVLKAFGRGR DALASFTGQA ERLRTTELAK ARSQATVNVA LTAIPELTLA ACLVLGALMV HQGTLTIGAL TAFFATVAVM SAPVVDLGMT LSMTLNARTA VDRYFDVLTT TNPLTDPVDP VDPPEPHGHV RLRDVTFRYD DATRPVLDRV DLDLPAGTTT ALVGLTGSGK STLAMLIPRL YDVTGGAVEL DGVDVRRLRR TDVRRTVAVA FEDPTLFSAS VRDNVLLGVD DTLPGARKDE LLAEALDVAQ AQFTGHLPHG VDTRIGEEGL SLSGGQRQRL ALARAIAARP RVLVLDDPLS ALDVATEERV TARLREVLHD TTTLVIAHRP STVALADRVA VLQDGRITAV GTHTELLATD PHYRYVISSL EDDAAEHGIG TVPDPDPVPV LPPDGGGPDE LGTDATGARL
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