| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1805 |
|---|
| Symbol | |
|---|
| ID | 8649329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1943501 |
|---|
| End bp | 1945291 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003326383 |
|---|
| Protein GI | 269956594 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.759471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCC CCGAGAACGA CCACCTGACC CGTACCGAGT CCCGCGAGGT GCGCGCCCGC
TCCCTGGCGC TCCTGCGCAA CCTCCTGCGG CCCCACTCCC GGCCGTTGGC CTGGTCCGCC
GTCCTCGTGG TCGCGTCGAC CGCGGGGCAG GTCGCCGGGC CCGCCCTCGT GGCCACCACC
ATCGACCATG CGATCCCCGC GCTCGACGAC GGCCGCCAGG GGCCTCTCGT CGTCTACGGC
ATCCTCCTCG TGGTCGCCGC CGTCGTCGCC GGCCTCGCGA ACGGCGCCTA CGTGCGTGCC
GCCGCCACGA TCTCCCAGGC CGTCCTCCTC GAGCTGCGCC GGCGCGTGTT CCGCCAGACC
CAGCGCCTGA GCCTCGAGTT CCACGAGACG TACACCTCGG GGCGCATCAT CAGCCGCCAG
ACCTCCGACC TCGAGGCCCT GCGCGAGCTC CTCGACGGCG GGCTGACCGG CGTCGTCGCC
AACCTCCTGA CGATGACGTT CACGGCCGTC GGTCTTGCGC TCGTGGACTG GCGCTCCGCC
GTGATCCTCT CCGCCGCGAT GGTGCCCGCC TGGCTCCTGA CGCGCTGGTT CCAGCGCCGT
TCGCAGGTGT ACTACCGCCA GCAGCGCACC GCCTCGGCCC GCCTGATCGT CAAGTTCGTC
GAGACGATGA CGGGCATGCG TGCCGTGCAG GCGTTCCGCC GCGAGCCGAG CACCGAGCGC
GACTACGAGC GGTACGCCGA CGAGTACCGC AAGGCCAACC TCAACACGTT CTCCCTCAAC
GGCCGCTACC AGCCCGGGCT CATCCTCATC GGCAACCTCA CGGTCGTCGT CGCCCTCGCC
TACGGCGGCT CGCGTGCCCT GCACGGCGAG CTCGCCGTCG GCGTCCTGGT CGCCGCCCTG
CTCTACGTCA AGCGCTTCTT CGCGCCCATC CAGCAGATCG GCATGTTCTA CAACGGGTTC
CAGTCCGCCA CGGCTGCGCT CGAGAAGCTC TCCGCGCTGC TCGCCGAGGA ACCCACCGTC
GTCGCACCCG CCCACCCCGT CCCGCTGCCC GCTGCCCGCG GCGACGTCCG GCTCGACCAC
GTCACGTTCC GCTACCCGCG TGGCCCCGTC GTCCTGCCCG ACCTCGACCT GCACATCCCC
GCCGGGCAGA CCGTCGCTCT CGTCGGCACC ACCGGCGCCG GCAAGTCCAC CCTCGCCAAG
CTCGTCACCC GCTTCTACGA CGCGACCAGC GGCGCCGTCC GCCTCGACGA CATCGACATC
CGCGACCTCG CGGGCACCGA CCTGCGCCGT GCCGTCGTCA TGGTCACCCA GGAGGCCTAC
CTGTTCTCGG GCTCCGTGCG CGAGAACATC GCCCTCGGTC GCCCTGACGC GAGCCAGGCC
GAGATCGAGG CCGCCGCCCG AGCCGTCGGC GCGCACGACT TCATCACCGC CATGCCCGAC
GGCTACGACA CCGACGTCAA CAAGCGCGGC GGGCGCGTCT CCTCCGGGCA GCGCCAGCTC
CTGTCCTTCG CCCGCGCATT CCTCGCCAAC CCCGCCGTCC TCGTCCTCGA CGAGGCCACC
TCGTCCCTCG ACATCCCCGG CGAGCGACTC GTCCAGCGCG GCCTGAAGAC CCTGCTGGCC
GGACGCACCG CCATCATCAT CGCCCACCGG CTGTCCACCG TCTCCGGCGC CGACCGCGTC
CTGGTCATGG AGCACGGCCG CGTCGTCGAG GACGGCACCC CCGCCGAGCT CGTCGCCGCC
GACGGCCACT ACGCCCGCCT CCACACCGCC TGGCAGGACT CGCTCGTCTG A
|
|---|
| Protein sequence | MSTPENDHLT RTESREVRAR SLALLRNLLR PHSRPLAWSA VLVVASTAGQ VAGPALVATT
IDHAIPALDD GRQGPLVVYG ILLVVAAVVA GLANGAYVRA AATISQAVLL ELRRRVFRQT
QRLSLEFHET YTSGRIISRQ TSDLEALREL LDGGLTGVVA NLLTMTFTAV GLALVDWRSA
VILSAAMVPA WLLTRWFQRR SQVYYRQQRT ASARLIVKFV ETMTGMRAVQ AFRREPSTER
DYERYADEYR KANLNTFSLN GRYQPGLILI GNLTVVVALA YGGSRALHGE LAVGVLVAAL
LYVKRFFAPI QQIGMFYNGF QSATAALEKL SALLAEEPTV VAPAHPVPLP AARGDVRLDH
VTFRYPRGPV VLPDLDLHIP AGQTVALVGT TGAGKSTLAK LVTRFYDATS GAVRLDDIDI
RDLAGTDLRR AVVMVTQEAY LFSGSVRENI ALGRPDASQA EIEAAARAVG AHDFITAMPD
GYDTDVNKRG GRVSSGQRQL LSFARAFLAN PAVLVLDEAT SSLDIPGERL VQRGLKTLLA
GRTAIIIAHR LSTVSGADRV LVMEHGRVVE DGTPAELVAA DGHYARLHTA WQDSLV
|
|---|
| |