| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1776 |
|---|
| Symbol | |
|---|
| ID | 8649300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1911154 |
|---|
| End bp | 1912833 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | Amidohydrolase 3 |
|---|
| Protein accession | YP_003326354 |
|---|
| Protein GI | 269956565 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.312253 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGTCGA CGCTCTATCG CAACGGACTC GTTCATTCCT CGGCGGACCC CTTCGCCGAG
GCCCTGCTGG TCGACGACGG GGTCGTCGCC TGGATCGGCG CCGAGGACAC CGCCGCCGGG
CTCGCGGCCC GCGCCGACCG CGTCATCGAC CTCGACGGCG CCCTCGTGGC GCCCGGGTTC
GTCGACGCGC ACGTGCACAC CCTCGAGACC GGCCTCGCCC TGGAGTCCGT CGACCTGTCC
CCGGCCGGCG CGCGCACCCG TGCCGCCGCG CTCGACGCCG TCGCCGCCGG CGCCCGCCGC
CTCGACGCCG CCGACCCCGA CGGCGACGAG GTGCTCCTCG CGTTCGGCTG GGACGAGACG
GCCTGGCCCG AACGCACCCC CCTGACCCGC GAGGACCTCG ACGCCGCCGC CGGCGGCCGC
CCCGTCTACG CCGCGCACGC CGACATGCAC CACGCCGTCG TCTCCACCGC CCTGGCCGCG
AGCGCCGGCC TGGACCGTCT GCCCGGCTGG TCGGCGGCCG GACTGGTGAT CGGGGAGGCG
TTGCGGGTGG CGCGCGACGT GGCGCAGGAG CTGCCGCCGG CGCGACGGGT GCGTGCGTAC
CGGGTGGCGC TGCAGCGGGC CGCGGAGCTC GGCATCGTGT CGGTGCACGA GATGAGCGCC
GCGCACACGG ACACCCGCGA AGGACTCCGC GAGCTGGTGG CGCTGTCCGA GCAGGAGCCG
CTGCCGCAGG TGGTGGCGTA CCGCGGTGAG CTCGTGGAGT CGCCCGACGA CGTGCGCGAG
CTGCTGGCCC AGCTGCCGTT CCTGGCGGGC ATCGGTGGGG ACGTCAACGT GGACGGGTCG
ATCGCCGCAC GCACGGCGGC GCTGCGTCAG CCGTACACCG ACCATCGCCC GCTGCCGGGC
TCGGCGCTGA CCGGGGACCA CGGGGACGGG TTGGCGTACC TGTCGGCGGA GGAGATCGGG
GCGCACCTGG CGGCCTGCTC CGCGGTGGGG GTGCAGGGCG GGTTCCACGT CGTGGGGGAC
CGGGCCATGG ACCTGCTGGT GCTGGGGCTG GAGATCGCGG CGTCGGAGGA TCGCGGCGGG
CACGGTCCGG GGCCGTTGCG CGCAGCACGG CACCGGGTGG AGCACGCCCT GTTCGTGGAC
GCGTCCGCGC TCGCGTCGCT GCTGCTGTAC GGGGTGTCGT TGTCGATCCA GCCGGCGTGG
GCGTCCACGT GGGGTGGCGT CGACGGGTTG TGGGCGCAGC GGCTGGGGGT GGCGCGGGCG
GGCAACATGT CACCGTTCGC GGACCTGGCC GGTGCGGGCA TCCCGCTGGC GTTCGGGTCG
GACGCCCCCG TGACGGCGCT GGACCCGTGG CAGGCGATCC GTGCGGCGGT GTCGCACGAG
GACGCCGAGC AGCGCCTGTC GGGGCGGGCG GCGTTCCGGG CGCACACGCG CGGCGGGTGG
CGGCTCGCTG GGCTCGACGG CACGGGGGCG GGGGAGCTTA CGGTCGGTGC CCCGGCGCAC
CTGGCGGTGT GGCGGGCCGA CTCCTACGGC GTGCTGTCCT CGGGTCGTGG TCTGACGTCG
TGGAGCGCGG AGGCGCGTGC GGGGCAGCCG GTGCTGCCCG ACCTGCACCT GGACGCCCGC
GAGCCGGAGT GCCTCCAGAC GGTCCGCGCG GGCGTGCCGA TCTACGACAC GTTCGCCTGA
|
|---|
| Protein sequence | MTSTLYRNGL VHSSADPFAE ALLVDDGVVA WIGAEDTAAG LAARADRVID LDGALVAPGF
VDAHVHTLET GLALESVDLS PAGARTRAAA LDAVAAGARR LDAADPDGDE VLLAFGWDET
AWPERTPLTR EDLDAAAGGR PVYAAHADMH HAVVSTALAA SAGLDRLPGW SAAGLVIGEA
LRVARDVAQE LPPARRVRAY RVALQRAAEL GIVSVHEMSA AHTDTREGLR ELVALSEQEP
LPQVVAYRGE LVESPDDVRE LLAQLPFLAG IGGDVNVDGS IAARTAALRQ PYTDHRPLPG
SALTGDHGDG LAYLSAEEIG AHLAACSAVG VQGGFHVVGD RAMDLLVLGL EIAASEDRGG
HGPGPLRAAR HRVEHALFVD ASALASLLLY GVSLSIQPAW ASTWGGVDGL WAQRLGVARA
GNMSPFADLA GAGIPLAFGS DAPVTALDPW QAIRAAVSHE DAEQRLSGRA AFRAHTRGGW
RLAGLDGTGA GELTVGAPAH LAVWRADSYG VLSSGRGLTS WSAEARAGQP VLPDLHLDAR
EPECLQTVRA GVPIYDTFA
|
|---|
| |