Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1744 |
Symbol | |
ID | 8649268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 1885782 |
End bp | 1886870 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | integrase family protein |
Protein accession | YP_003326325 |
Protein GI | 269956536 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.145227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGTCGCCC CGCCCCGCCT CACACTCCTG ACCGTCGGTG ACGCCGTCGA CCGTTATCTC GCCTCCGTGC GCAAGGATGC CGTGCGCGGG GTCCTCTCCC CCGCCACCGC GCGGTCCTAC ACCCGGGACG TCACCGAGCT CGCGTCCCTG CTCGGCCCGC TGCGGGTGCT CGACGACGTC ACGGGCGACG ACGTCGACGA CGCCCTCGTG CGCTATCAGG GCAGCCCTGA CGCCCGCTTC ACAGACCCCG ACCGCAAGCG GGGCCCCGGG CGCTCGGTCG CGACCGTCAA CCGGTTCCGG CAGTCAGCCA CCCGCTTCTT CTCGCACGCC GCACGGGAGT GCTGGGTGCA GGCCGACCCG ATGCTCTGGG CGGCGCCCCC GGCCCGGGTG CGCGGCGGCC TCCGGGTGGC CCGCACCGCG CTGACCTCGG CGGCCGCGCA GGCGCTCCTC GAGACGTCCG CGGACACCAC TCCTCCGGCG AGGTCCCGCC ATGACCAGGA CCTCGCCCTG CGCGACCGCC TCGTCGTCGC GCTCCTGCTG GTGCTCGGCC CGCGCGTCTC GGAGCTCGCG GGCGCCGACG TCGAAGACTT GGCCCGCGAG CCCGGGCAGA CCCGCTGGCG CATCGTCGGC AAGGGCGGCG TGGTGCGCAC GGTCGCGCTG TCCGAGCCGC TCGCGGCCAC GCTCGACGAG TACGTCACGG GGCTGCGGCC ACGCCTGGCC GCGCTGCGCC CCGACGACGA CGACGCCCAG CGCGCCCTGC TGCTCACCTG GCGGGGCCGG CGCGTGGACA CCCAGGCCAT CCGCGGCCTC CTCGCCCGCG CCGTCGGACG GATGCCGGCC CCGTACCGCC GCCCGGCGAC CCCGCACGCC CTGCGGCACA CCACCGCAAC ACTGCTGGTG GCTCAGGGCT GGGACGTCAA GGTGGTGGCC GAGCTGCTCG GCCACGCGTC GATCGCGACC ACGGGGGTCT ACCTGGACCG CATCGAGGGC GAGCTCGCGG CCGCGATCCG CGCGCACCCG CTCACGGCGA CCCTCGACAC CGCCCTGACC GCCGGGGCCG GCCGGGAGCC AGCCGGGCCA CGCCGGTGA
|
Protein sequence | MVAPPRLTLL TVGDAVDRYL ASVRKDAVRG VLSPATARSY TRDVTELASL LGPLRVLDDV TGDDVDDALV RYQGSPDARF TDPDRKRGPG RSVATVNRFR QSATRFFSHA ARECWVQADP MLWAAPPARV RGGLRVARTA LTSAAAQALL ETSADTTPPA RSRHDQDLAL RDRLVVALLL VLGPRVSELA GADVEDLARE PGQTRWRIVG KGGVVRTVAL SEPLAATLDE YVTGLRPRLA ALRPDDDDAQ RALLLTWRGR RVDTQAIRGL LARAVGRMPA PYRRPATPHA LRHTTATLLV AQGWDVKVVA ELLGHASIAT TGVYLDRIEG ELAAAIRAHP LTATLDTALT AGAGREPAGP RR
|
| |