| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1723 |
|---|
| Symbol | |
|---|
| ID | 8649247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1867087 |
|---|
| End bp | 1868640 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | Fmu (Sun) domain protein |
|---|
| Protein accession | YP_003326304 |
|---|
| Protein GI | 269956515 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00114833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC ACGACGACCC CCGACGCCAC GACGGCGGCG ACCGCCGCGA CTCCCGCGGA
CGCCAGCGCG GCGCCGCCCG ATCCCGCGGT GACCAGTCCC GCACCACCCA GGCACCCTCG
CAGCGCCGCC GGCGCACCGA CCCCGCCCGC ACCGCCGCCT TCGACGTGCT GCGCGACGTC
GACGGCTCCG ACGCCTACGC CAACCTCGTC CTGCCGCCCC TGCTGCGTGA ACGCGGCATC
ACCGGCCGCG ACGCCGCCTT CGCCACCGAG CTCACCTACG GCACCCTGCG CCTGCGCGGC
CGCTACGACG CCATCCTGAC CCGCTGCGTC GACCGGCCCC TCGACCGGCT CGACCCCGAC
GTGCTCGACG TGCTGCGCCT CGGCGCCCAC CAGATCCTCG GCATGCGCGT CCCCACCCAC
GCCGCCGTCT CCGAGACCGT CGCCCTGACC CGCGACCGCG TCGGCACCGG CGCCTCACAG
CTCGTCAACG CCGTCCTGCG CCGCGTCACC ACCACCCCCC TGACGGACTG GCTCGACGAG
CTCCGCGCCG ACGCCCCCGA CCCCGTGACC GCCTCCGCCG TCACCGGCTC CCACCCCGTC
TGGATCGCCC GCGCCCTGCG CGAGGCACTG GCGGCCGACG GCCGCGGCGG CGCCGACCTC
GATGCCGAGC TCGACGCCCT CCTCGACGCC GACAACGCCG CCCCCCGCGT CACCCTCGTC
GCCCGCCCCG GCCTCATCAC CCCCGACGAC GTCCGCGCCA CCGCCCCCGA CGGCATCACC
CTCCACCCCG GCCGCTGGCT CCCCACCGCC CTCATCCTCG GCGGACAAGA CCCCCTCAGC
GTCCCCGCCG TCGCCGACGC ACGCGCCGGC GTCCAGGACG AAGGCTCCCA GGCCGTCGCC
CTGGCGCTCG CGGCTGCGCC GCTGGAGGGC CGGGACGCAC GCTGGCTCGA CCTGTGCGCA
GGCCCGGGCG GCAAGGCGTC GCTGCTGGCA GCACTGGCCT CACAGCGCGG CGCCACGATC
GTCGCCAACG AGGTGGCCCC GCACCGGGCG AACCTGGTGC GCAAGGCGCT ACGGGCGATA
CCCGACGGCG TCGTCGAGCA GGTACGCACC GGCGACGGGC GCGACGTCGG GGAACAGGAA
CCCGGCGCCT ACGACCGCGT GCTCGTCGAC GCCCCGTGCA CAGGACTGGG CGCGCTGCGC
CGCCGGCCCG AGTCCCGCTG GCGCCGCACC CCGGCCGACC TCTCCGCACT GACCGGGCTG
CAGCGCGACC TGCTGTCGTC AGCGCTCGAC GCCGTCCGGG TCGGGGGAGT GGTCGCATAC
GTGACCTGCT CCCCGCACCT GGCCGAGACC CGCGTCGTCG TCGACGACGT CCTACGCCGT
CGGGCCGTGG ACGGCATCCC CGACGCCGAA CGGCTCGACG CCCGCGAAGC CGTGCGCGCC
ATCGTGAACC CCGGGACGGA CATCCCGCTC GGGGAACGCG ACGACGTCCA GCTGTGGCCG
CACGTACACG GCACGGACGC CATGCACCTC ACCCTGCTGC GCCGCACCCG CTGA
|
|---|
| Protein sequence | MSAHDDPRRH DGGDRRDSRG RQRGAARSRG DQSRTTQAPS QRRRRTDPAR TAAFDVLRDV
DGSDAYANLV LPPLLRERGI TGRDAAFATE LTYGTLRLRG RYDAILTRCV DRPLDRLDPD
VLDVLRLGAH QILGMRVPTH AAVSETVALT RDRVGTGASQ LVNAVLRRVT TTPLTDWLDE
LRADAPDPVT ASAVTGSHPV WIARALREAL AADGRGGADL DAELDALLDA DNAAPRVTLV
ARPGLITPDD VRATAPDGIT LHPGRWLPTA LILGGQDPLS VPAVADARAG VQDEGSQAVA
LALAAAPLEG RDARWLDLCA GPGGKASLLA ALASQRGATI VANEVAPHRA NLVRKALRAI
PDGVVEQVRT GDGRDVGEQE PGAYDRVLVD APCTGLGALR RRPESRWRRT PADLSALTGL
QRDLLSSALD AVRVGGVVAY VTCSPHLAET RVVVDDVLRR RAVDGIPDAE RLDAREAVRA
IVNPGTDIPL GERDDVQLWP HVHGTDAMHL TLLRRTR
|
|---|
| |