| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1646 |
|---|
| Symbol | |
|---|
| ID | 8649170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1784691 |
|---|
| End bp | 1785581 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | 3-methyl-2-oxobutanoatehydroxymethyltransferase |
|---|
| Protein accession | YP_003326227 |
|---|
| Protein GI | 269956438 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0403081 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACC ACGCGAACGA CCCGGCGGTC GAGCCTGTCG AGACCACGCC GCGGCGCAAG
CGCGTGACCC CGCCGTCGCT GGCCGCCCTC GCGGCCGCCG GCGAGAAGCT CGTCATGGTC
ACCGCCTACG ACTACCCGGC CGCCGTCGCC GCCGAGAAGG CGGACGTCGA CATCGTGCTG
GTCGGCGACT CCGGCGCCCA GGTGCAGCTC GGCTACGACT CGACCGTGCC CGTCTCGGTC
GACGAGATGC TCGTGCTCGC CCAGGCGGTC CGCCGCGGCA CGACGACGGC GCTCGTCGTC
GTCGACCTCC CGTTCGGCTC GTACGAGGTC TCCGACGAGC AGGCCGTCGC CACCGCGATC
CGGTTCGTCA AGGAGGCCGG CGCCGACGCC GTGAAGCTCG AGGGCGGCGG CCGCGTGCCC
GCCGCGCGCA TCCGGGCCAT CACCGCGGCC GGCATCCCCG TGATGGGTCA CGTGGGCCTC
ACCCCGCAGA CGGCGGTCGC GCTCGGCGGG TTCGCCGCAC AGGGCCGCAC CGTCGAGGCG
GCCCGCCGTG TGCGCGACGA GGCGCTCGCC GTCCAGGAGG CGGGGGCGTT CTCCCTGGTG
CTTGAGGCGA TCCCGTCCGA CCTCGCCGCC GCGATCCGCC CGCAGCTCAC CATCCCCGCG
ATCGGCATCG GCGCCGGCCC CGCCGTCGAC GGCCAGGTTC TCGTGCTGCA CGACCTGCTC
GGGCTGACCG AGGGCCGCGC CGCCAAGTTC GTCAAGAGGT ACGCCACCGT CCTGGACGCG
ATGACCGAGG GTATCGGCGC CTACGCGGCC GACGTCCGCT CGGGCGCCTA CCCCGGCCCG
GAGCACGGCT ACGCCATGCC CGAGGGCGTG CTGGACGCGC TCGACGGCTG A
|
|---|
| Protein sequence | MSHHANDPAV EPVETTPRRK RVTPPSLAAL AAAGEKLVMV TAYDYPAAVA AEKADVDIVL
VGDSGAQVQL GYDSTVPVSV DEMLVLAQAV RRGTTTALVV VDLPFGSYEV SDEQAVATAI
RFVKEAGADA VKLEGGGRVP AARIRAITAA GIPVMGHVGL TPQTAVALGG FAAQGRTVEA
ARRVRDEALA VQEAGAFSLV LEAIPSDLAA AIRPQLTIPA IGIGAGPAVD GQVLVLHDLL
GLTEGRAAKF VKRYATVLDA MTEGIGAYAA DVRSGAYPGP EHGYAMPEGV LDALDG
|
|---|
| |