Gene Xcel_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1564 
Symbol 
ID8649087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand+ 
Start bp1703874 
End bp1704605 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content71% 
IMG OID 
Productpseudouridine synthase 
Protein accessionYP_003326152 
Protein GI269956363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.531508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGACG GCGTCCGGCT GCAGAAGGTG CTCGCCGACG CCGGGTACGG TTCGCGGCGC 
AAGGCCGAGC AGCTGATCGA GGACGGGCGC GTGAGCGTCG ACGGCCAGAT CATCATCGAG 
CTCGGCGTGC GCGTGGACCC CGCGAAGAAC GTCATCCACG TCGACGGCCT GCGGCTGCAG 
CTCGACACGA ACAAGGTGAC GCTCGCGGTC AACAAGCCGG CCGGCGTGAT CTCCGCGATG 
AGCGACGAGA AAGGGCGGCC GACGCTGGCC GACCTGGTGC GCAACCGCGA GGAGCGCCTG 
TTCCACGTCG GCCGCCTGGA CCTCGACTCC GAGGGCCTGA TCCTGCTGAC CAACGACGGC 
GAGCTCGGCA ACCGCCTGGC CCACCCGAAG TACGAGGTGC CGAAGACGTA CCTGGTGACC 
GTCAGCGGCG GCGACGTGTT CCCGCGCATC GTGCGGGCGC TGCTCGACGG CGTGGACCTC 
GAGGACGGCC CGGCGCGCAT GGACCGCGTC AAGATCGTGC AGGCCCTCGA AGGGATGACC 
ATGGTCGAGG TCGTGCTGCA CGACGGCCGC AACCGCGTCG TGCGCCGCAT GTTCGACGCC 
GTCGACCGCC CCGTGGAGCG CCTGGTGCGC ACCAAGATCG GCCCGATCGC GCTGGGCGAC 
CAGCGTCCGG GCACCCACCG CGTGCTGAGC CGCACAGAGG TCGGCAGCCT CATGGCCGCC 
GTCGGCCTGT GA
 
Protein sequence
MPDGVRLQKV LADAGYGSRR KAEQLIEDGR VSVDGQIIIE LGVRVDPAKN VIHVDGLRLQ 
LDTNKVTLAV NKPAGVISAM SDEKGRPTLA DLVRNREERL FHVGRLDLDS EGLILLTNDG 
ELGNRLAHPK YEVPKTYLVT VSGGDVFPRI VRALLDGVDL EDGPARMDRV KIVQALEGMT 
MVEVVLHDGR NRVVRRMFDA VDRPVERLVR TKIGPIALGD QRPGTHRVLS RTEVGSLMAA 
VGL