Gene Xcel_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1560 
Symbol 
ID8649083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1699978 
End bp1700973 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content77% 
IMG OID 
Producttyrosine recombinase XerD 
Protein accessionYP_003326148 
Protein GI269956359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.736869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAGCA CCGTTGCCCC GCCCGGGGTC GTCGTCAGCG GCCCCCTGGA GGCCGCCCTC 
GACGACTACC TGGCACACCT GCGGGTGGAG CGAGGCCTGT CCCACAACAC CACCGCCGCC
TACCGCCGCG ACCTCGCCCG GTACGTGCGG CACCTCGAAC GGCTCGGGCG CACCTCCCTC
GGCGCGGTGC GCGAGGACGA CGTCACCGGG TTCGTCACCG CCGTCCGAGA GGGCGCCGAC
GGCGGGGCGC GGCTCTCGGC GTCGTCGACC GCCCGCGCCC TGGCCGCCGT GCGCGGCTGG
CACCGGTTCG CGCACGCCGA AGGGCTGGCG ACGCAGGACC CCGCCGCCGA GGTACGCGCC
CCGACCCAGC TCCGCCGCCT CCCGCACGCC CTGAGCGTCG ACGCCGTCAC CCGCCTGCTC
GACGCCGCCG GCGTCGGCGA CGGACCCGTG CCGCTGCGCG ACCGGGCGCT GCTCGAGCTC
CTGTACTCGA CCGGCGGGCG CATCAGCGAG GTGGTCGGCC TCGACGTCGA CGCCCTCGGC
TGGCTCGGCG CCGGATCAGC GCCCGGCGAC GGCGCAGGCG ACGACGGCCC CGCCGTCGTG
CGCCTGCACG GCAAGGGGGA CAAGCAACGC ATCGTGCCCG TCGGCTCCTA CGCCATCGCC
GCGCTCGACG CCTACCTCGT GCGGGCCCGG CCAGCGCTCG CGGCGGCCGG CAGCGGCACG
CCCGCGCTCT TCCTCAACAC GCGCGGACGA CCCCTCTCGC GGCAGTCCGC GTGGGCCGTG
CTGCAGGCGG CCTCCGCCCG CGCCGGGCTC GAGAACGTCT CCCCGCACAC GCTGCGGCAC
TCGTTCGCCA CCCACCTGCT GCAGGGCGGC GCCGACGTGC GCGTGGTCCA GGAGCTGCTC
GGGCACGCCT CGGTGACGAC GACGCAGATC TACACGATGG TCACCCCCGA CACGCTGCGC
GAGGTGTACG CGGCGACGCA CCCGCGGGCG CGGTGA
 
Protein sequence
MSSTVAPPGV VVSGPLEAAL DDYLAHLRVE RGLSHNTTAA YRRDLARYVR HLERLGRTSL 
GAVREDDVTG FVTAVREGAD GGARLSASST ARALAAVRGW HRFAHAEGLA TQDPAAEVRA
PTQLRRLPHA LSVDAVTRLL DAAGVGDGPV PLRDRALLEL LYSTGGRISE VVGLDVDALG
WLGAGSAPGD GAGDDGPAVV RLHGKGDKQR IVPVGSYAIA ALDAYLVRAR PALAAAGSGT
PALFLNTRGR PLSRQSAWAV LQAASARAGL ENVSPHTLRH SFATHLLQGG ADVRVVQELL
GHASVTTTQI YTMVTPDTLR EVYAATHPRA R