Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1560 |
Symbol | |
ID | 8649083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1699978 |
End bp | 1700973 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | tyrosine recombinase XerD |
Protein accession | YP_003326148 |
Protein GI | 269956359 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.736869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAGCA CCGTTGCCCC GCCCGGGGTC GTCGTCAGCG GCCCCCTGGA GGCCGCCCTC GACGACTACC TGGCACACCT GCGGGTGGAG CGAGGCCTGT CCCACAACAC CACCGCCGCC TACCGCCGCG ACCTCGCCCG GTACGTGCGG CACCTCGAAC GGCTCGGGCG CACCTCCCTC GGCGCGGTGC GCGAGGACGA CGTCACCGGG TTCGTCACCG CCGTCCGAGA GGGCGCCGAC GGCGGGGCGC GGCTCTCGGC GTCGTCGACC GCCCGCGCCC TGGCCGCCGT GCGCGGCTGG CACCGGTTCG CGCACGCCGA AGGGCTGGCG ACGCAGGACC CCGCCGCCGA GGTACGCGCC CCGACCCAGC TCCGCCGCCT CCCGCACGCC CTGAGCGTCG ACGCCGTCAC CCGCCTGCTC GACGCCGCCG GCGTCGGCGA CGGACCCGTG CCGCTGCGCG ACCGGGCGCT GCTCGAGCTC CTGTACTCGA CCGGCGGGCG CATCAGCGAG GTGGTCGGCC TCGACGTCGA CGCCCTCGGC TGGCTCGGCG CCGGATCAGC GCCCGGCGAC GGCGCAGGCG ACGACGGCCC CGCCGTCGTG CGCCTGCACG GCAAGGGGGA CAAGCAACGC ATCGTGCCCG TCGGCTCCTA CGCCATCGCC GCGCTCGACG CCTACCTCGT GCGGGCCCGG CCAGCGCTCG CGGCGGCCGG CAGCGGCACG CCCGCGCTCT TCCTCAACAC GCGCGGACGA CCCCTCTCGC GGCAGTCCGC GTGGGCCGTG CTGCAGGCGG CCTCCGCCCG CGCCGGGCTC GAGAACGTCT CCCCGCACAC GCTGCGGCAC TCGTTCGCCA CCCACCTGCT GCAGGGCGGC GCCGACGTGC GCGTGGTCCA GGAGCTGCTC GGGCACGCCT CGGTGACGAC GACGCAGATC TACACGATGG TCACCCCCGA CACGCTGCGC GAGGTGTACG CGGCGACGCA CCCGCGGGCG CGGTGA
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Protein sequence | MSSTVAPPGV VVSGPLEAAL DDYLAHLRVE RGLSHNTTAA YRRDLARYVR HLERLGRTSL GAVREDDVTG FVTAVREGAD GGARLSASST ARALAAVRGW HRFAHAEGLA TQDPAAEVRA PTQLRRLPHA LSVDAVTRLL DAAGVGDGPV PLRDRALLEL LYSTGGRISE VVGLDVDALG WLGAGSAPGD GAGDDGPAVV RLHGKGDKQR IVPVGSYAIA ALDAYLVRAR PALAAAGSGT PALFLNTRGR PLSRQSAWAV LQAASARAGL ENVSPHTLRH SFATHLLQGG ADVRVVQELL GHASVTTTQI YTMVTPDTLR EVYAATHPRA R
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