Gene Xcel_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1558 
Symbol 
ID8649081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1698431 
End bp1699345 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_003326146 
Protein GI269956357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.14299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACGA GCCAGACCGC CCTCGGCACC GTTCGTGACC GCATCGGCGC CTACGTCGCT 
CTGACCAAGC CGCGCATCAT CGAGCTGCTC CTGGTCACGA CGATCCCGAC GATGTTCCTC
GCCGAGCGTG GCCTGCCCGA CCTGTGGCTG GTGCTCGCCA CCCTGATCGG CGGGGCGCTG
GCCGCCGGGT CGGCGAACGC CTACAACTGC TACTACGACC GCGACATCGA CGCGATCATG
AACCGCACCA AGCGCCGGCC GCTGGTGACG GGGGAGATCA CGCCGCGCAA CGCGCTCATC
TTCGCGACCG TGCTCGGCGT CGTGTCCCTG GTGTGGTTCG CGTTCCTGGT CAACCCGTTC
GCGGCGTGGC TGACGTTCGC CGCGATCGCG CTGTACGTCG TCTTCTACAC GATGATCCTC
AAGCGCCGGA CGCCGCAGAA CATCGTGTGG GGCGGCATCG CGGGCTGCAT GCCCGTGTTC
ATCGGCTGGG CCGCGGTCAC CGAGTCGCTG AGCTGGGCCG CCGTCGCCCT GTTCGGCATC
ATCTTCTTCT GGACGCCGCC GCACTACTGG CCGCTGAGCG TCAAGTTCAA GCGGGACTAC
GCCAACGCCG GTGTGCCCAT GCTCCCCGTG GTCGCCTCCG ACCGCCGCGT CGCGGTCGAG
ATGATCGTCT ACACCGCGGC GATGTTCGTC TGCTCGTTCG CGCTGATCCC CCTCGCGGGC
ATGACGTGGG TGTACACGGT GATCGCCGTG GTGCTCGCCG CCTGGTTCGG CTGGCAGACG
TGGCTCATGC TCGACAACAC GCGACGCGGC CGGGCCAAGA CCGGCAAGGT CGCCATGAAC
GTCTTCCACG CGTCCATCAC GTACCTCACC GTGCTGTTCG TCGCCGTCGC CGTGGACGTG
TTCCTGCCCT TCTGA
 
Protein sequence
MSTSQTALGT VRDRIGAYVA LTKPRIIELL LVTTIPTMFL AERGLPDLWL VLATLIGGAL 
AAGSANAYNC YYDRDIDAIM NRTKRRPLVT GEITPRNALI FATVLGVVSL VWFAFLVNPF
AAWLTFAAIA LYVVFYTMIL KRRTPQNIVW GGIAGCMPVF IGWAAVTESL SWAAVALFGI
IFFWTPPHYW PLSVKFKRDY ANAGVPMLPV VASDRRVAVE MIVYTAAMFV CSFALIPLAG
MTWVYTVIAV VLAAWFGWQT WLMLDNTRRG RAKTGKVAMN VFHASITYLT VLFVAVAVDV
FLPF