| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1556 |
|---|
| Symbol | |
|---|
| ID | 8649079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1694700 |
|---|
| End bp | 1695833 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | transaldolase |
|---|
| Protein accession | YP_003326144 |
|---|
| Protein GI | 269956355 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.538221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCC CAACCGACAC CCGTCCCACG CACAGGCTCT CGGAGGCCGG GGTGTCGATC
TGGCTCGACG ACCTGTCCCG CGAGCGCCTC GCCACGGGCA ACCTCGCGGC ACTGGTCGCC
GAGAAGGACG TGGTGGGTGT CACCACCAAC CCCACGATCT TCGCCGCCGC CCTCGGCACG
GGTGACGCGT ACGCGTCGGC CCTCGCGGAG CTGGCGGGCA CCGACGTCGA GGCCGCCGTC
GAGAGGATCA CCACGGACGA CGTGCGGGAG GCTGCCGACG TGCTGCGCCC CGTCTTCGAC
GCCACGCACG CCGTCGACGG CCGCGTGTCG ATCGAGGTGG ACCCGCGCCT GGCCCGCGAC
ACGGAGCGCA CGGTCGCGAC GGCGGTGCGG CTCTGGGAGA CGGTCGGCCG CCCCAACGTG
ATGATCAAGA TCCCCGCGAC GCTCGAGGGT CTGCCGGCCA TCACGCGCAC GCTCGCGCAG
GGCATCTCGG TCAACGTGAC CCTGATCTTC TCGATCGAGC GCTACCGCGC CGTGCTGGAC
GCGTGGCTCG CCGGCCTCGA GCAGGCGCAG GCGAACGGGC ACGACCTGGC GGGCATCGGC
TCGGTGGCCT CGTTCTTCGT CTCCCGCGTG GACGCGGCCG TGGACGCTGC CCTGGAGAAG
GTGGGCACCG AGGAGGCCCT CGCGCTGCGC GGCAAGGCCG CGATCGCGAA CGCGCGCCTC
GCGTACGCCG CGTACCGGGA CGTCGTCGGC TCGGAGCGCT GGGCCGCCCT GCAGGGCGCG
GGTGCCCAGC CGCAGCGCCC GCTGTGGGCG TCGACGGGGG TGAAGAACCC CGAGTACCGC
GACACCCTCT ACGTCGACGA GCTGGTGGTC GCGGGCGTCG TCAACACCAT GCCGCAGGCC
ACGCTCGACG CGTTCGCCGA CCACGGCATC GTGCTCGGCG ACACCGTGAC CGGCACGGCC
GACGACGCCG CGGAGCAGAT CGCCGCGATC GAGGCCCAGG GGATCTCCCT CGCGGACGTC
ACCGCCCGGC TCGAGACCGA GGGCGTGAGC AAGTTCGAGG CGAGCTGGTC GCAGCTCCTC
GAGACGACGC AGGCCGGGCT GGACGCCGCG GCCTTCCAGG GAGGGGCCGC GTGA
|
|---|
| Protein sequence | MTSPTDTRPT HRLSEAGVSI WLDDLSRERL ATGNLAALVA EKDVVGVTTN PTIFAAALGT
GDAYASALAE LAGTDVEAAV ERITTDDVRE AADVLRPVFD ATHAVDGRVS IEVDPRLARD
TERTVATAVR LWETVGRPNV MIKIPATLEG LPAITRTLAQ GISVNVTLIF SIERYRAVLD
AWLAGLEQAQ ANGHDLAGIG SVASFFVSRV DAAVDAALEK VGTEEALALR GKAAIANARL
AYAAYRDVVG SERWAALQGA GAQPQRPLWA STGVKNPEYR DTLYVDELVV AGVVNTMPQA
TLDAFADHGI VLGDTVTGTA DDAAEQIAAI EAQGISLADV TARLETEGVS KFEASWSQLL
ETTQAGLDAA AFQGGAA
|
|---|
| |