Gene Xcel_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1546 
Symbol 
ID8649069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1685101 
End bp1686063 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content76% 
IMG OID 
Productprotein of unknown function UPF0052 and CofD 
Protein accessionYP_003326134 
Protein GI269956345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.566126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCGTAC CTTCCACCAA GCCCGCGGTG GTCGCGCTGG GCGGCGGGCA CGGGCTGTCC 
GCCAGCCTGC GCGCCCTGCG CCACGTCTCC GACCGGCTCA CCGCCGTCGT CACCGTCGCC
GACGACGGCG GGTCGTCGGG CCGGCTGCGC GAGGAGCTCG GCGTGCTCCC GCCCGGCGAC
CTGCGCATGG CGCTCGCGGC CCTGACCGAC GACTCCGACT GGGGGCGCAC GTGGTCGGCC
GTGCTCCAGC ACCGGTTCCA CACCGACGGA CCGCTGGACA ACCACGCCGT GGGCAACCTG
CTCATCACCG CCCTGTGGGA ACTGCTCGGC GACACCGTGA CCGGCCTGGA CTGGGTGGGC
AAGCTCCTGG GCGCGCGGGG GCGGGTGCTG CCCATGGCGT CGGTGCCGCT CGTCGTCGAG
GCGGACGTGC GCGCCGACGA CGGCCCCTGC ACCGTCATCG GGCAGGTCAA CGTGGCCACG
GCCGCCGGAC GGATCGAGCA GCTCCGGCTG CATCCGGCGG ACCCGCCCGC GTGCCCCGAG
GCCGTGGCCG CCGTCCGGGC GGCCGACTGG GTCGTGCTCG GGCCCGGCTC CTGGTACTCC
TCGGTGCTCG TGCACCTGCT GGTCCCCGAG CTCTCCGCCG CGCTGCACGA GACCTCCGCG
CGCCGCTGCG TGACGCTCAA CCTGTCGCCC GACGCCGAGA CGTCGGGGCT GACCGCCGTC
GACCTGCTGG ACGCGCTGCA CCACCACGCG CCGGGCCTGC GGATCGACGC GGTGCTGGCC
GACCCGTCGG CGGTCGAGGA CGTGGGCGCG GCCGAGGAGG CCGCGGTGCG GTTGGGCGCC
AGGCTGGTGA TGCGACAGGT GGCGCTCGGC GACGGCACCG CCCAGCACGA CGCGCTGCGC
CTCGCCGCCG CCTACCGTGA CGTGTTCGAC GGCGTCCTCG GCGACGTCAC CCCTGGCGAC
TGA
 
Protein sequence
MGVPSTKPAV VALGGGHGLS ASLRALRHVS DRLTAVVTVA DDGGSSGRLR EELGVLPPGD 
LRMALAALTD DSDWGRTWSA VLQHRFHTDG PLDNHAVGNL LITALWELLG DTVTGLDWVG
KLLGARGRVL PMASVPLVVE ADVRADDGPC TVIGQVNVAT AAGRIEQLRL HPADPPACPE
AVAAVRAADW VVLGPGSWYS SVLVHLLVPE LSAALHETSA RRCVTLNLSP DAETSGLTAV
DLLDALHHHA PGLRIDAVLA DPSAVEDVGA AEEAAVRLGA RLVMRQVALG DGTAQHDALR
LAAAYRDVFD GVLGDVTPGD