Gene Xcel_1544 details

Gene Information

• Locus tag: Xcel_1544
• ID: 8649067
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 1682183
• End bp: 1684162
• Gene Length: 1980 bp
• Protein Length: 659 aa
• Translation table: 11
• GC content: 73%
• Product: excinuclease ABC, C subunit
• Protein accession: YP_003326132
• Protein GI: 269956343

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.519608
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGATC CCGCCACGTA CCGTCCGGCG CCGGGGGAGA TCCCGACCTC GCCAGGGGTG 
TACCGGTTCC GGGACCCGCA CGGGCGCGTC ATCTACGTCG GCAAGGCGAA GAATCTGCGC 
TCGCGCCTGT CGAACTACTT CCAGGACCTG GCCAACCTGC ACTCGCGCAC CCAGACGATG 
GTCACCACGG CCGCGTCCGT CGAGTGGACG GTCGTGGGCA CCGAGGTGGA GGCGCTGGCC 
CTCGAGTACT CGTGGATCAA GCAGTTCGAC CCGCGGTTCA ACGTCAAGTA CCGGGACGAC 
AAGTCGTACC CGTTCCTGGC CGTCACGATG GCGGACGATT TCCCGCGCGC CCAGGTGATG 
CGCGGGGCCA AGCGGCCCGG GACGCGGTAC TTCGGCCCCT ACGGCCACGC GTGGGCGATC 
CGCGAGACCC TCGACCTGCT GCTGCGCGTC TTCCCGATCC GCACCTGCTC GGCCGGCGTG 
TTCAAGCGCG CGGCGCAGTC GGGCCGCCCC TGCCTGCTCG GGTACATCGA CAAGTGCTCG 
GCACCGTGCG TGGGCCGCAT CAGCCCGGCG GACCACAAGG CGCTGGCCGA GGACTTCTGC 
GCCTTCATGG CCGGGGACAC GCAGCGGTTC GTCCGCCGGA TCGAGAAGCA GATGCGGGAC 
GCCGCGGCGA ACATGGAGTA CGAGCAGGCC GCCCGCCTGC GCGACGACGT CCAGGCCCTG 
CAGCGCGCGC TGGAGAAGAA CGCCGTCGTG CTCGGCGACG CCACGGACGC CGACATCTTC 
GCCCTCGTCG GCGACGAGCT GGAGGCCGCC GTCCAGGTGT TCCACGTGCG CGGCGGCCGC 
GTCCGCGGCC AGCGCGGCTG GGTCGTGGAG AAGGTCGAGG ACATCACGGA CGGCGAGCTC 
GTCGAGCACC TGCTCCAGCA GGTCTACGGC GGCGACGCGG AAGCATCCGT CCCGCGCGAG 
GTGCTGGTCC CCGTGCTCCC GCCGGACCCG CAGCAGGTCA CGGCGTGGCT CGCCGGGCTG 
CGCGGCTCCC GCGTCGACGT GCGCGTGCCG CAGCGCGGCG ACAAGCGCGA GCTCGCCGAG 
ACCGTCCGCA AGAACGCCGA GCACGCCCTG ATGCTGCACC GCACCCGCCG CGCCGGGGAC 
CTCACCACCC GCAGCCAGGC GCTGCGCGAG CTGCAGGAGG CGCTCGACCT CGACACCGCC 
CCGCTGCGCA TCGAGTGCTA CGACGTCTCC CACACGCAAG GCACCTACCA GTCCGCGTCC 
ATGGTGGTGT TCGAGGACGG GCTGCCCCGC AAGGGCGAGT ACCGCTCCTT CAGCATCCGC 
GGCCCGGAGG GCGACGGCGC CCGCGACGAC ACCGCCGCCA TGTACGAGGT CATCACGCGG 
CGCTTCCGCC GCTACCTGGC CGACCGCGCC CGCTCCGGCG AGCTCGAGCT GGACCTGGAG 
TCGGGGGAGG TCGACCCGCA GGAAGAGCCC GCCGAGACCA AGAAGCGGTT CGCCTACCCG 
CCGAACCTCG TCGTCGTCGA CGGCGGGCCG CCGCAGGTCG CCGCGGCCCA GCGGGCGCTC 
GACGACCTCG GCGTCACCGA CGTCGCCCTG TGCGGGCTCG CCAAGCGCCT GGAGGAGGTC 
TGGGTGGCGC ACGACGACTA CCCGGTCATC CTCGAACGCT CCTCCGAGGG CCTCTACCTG 
CTGCAGCGCG CCCGCGACGA GGCCCACCGG TTCGCGATCA CCCAGCACCG CAAGCGGCGC 
TCCAAGGGAA TGACGGTCTC CGCGCTCGAC GGCGTCCCCG GCCTCGGCCC GGCACGGCAA 
AAGGCGCTGC TCACGCACTT CGGCTCCGTC AAGCGGCTGC GCGCCGCCTC CGTCGAGGAG 
ATCGCCTCCG TCCGCGGCAT GGGGACGACG ACGGCGCAGG CGGTCGTGGC GGCCCTCGCC 
GCGCCGCAGA CCCCGCCCAC CGCACCCGAC GCCGACCCGG CTGGCATCCT GGCCCCATGA 

 

Protein sequence

MPDPATYRPA PGEIPTSPGV YRFRDPHGRV IYVGKAKNLR SRLSNYFQDL ANLHSRTQTM 
VTTAASVEWT VVGTEVEALA LEYSWIKQFD PRFNVKYRDD KSYPFLAVTM ADDFPRAQVM 
RGAKRPGTRY FGPYGHAWAI RETLDLLLRV FPIRTCSAGV FKRAAQSGRP CLLGYIDKCS 
APCVGRISPA DHKALAEDFC AFMAGDTQRF VRRIEKQMRD AAANMEYEQA ARLRDDVQAL 
QRALEKNAVV LGDATDADIF ALVGDELEAA VQVFHVRGGR VRGQRGWVVE KVEDITDGEL 
VEHLLQQVYG GDAEASVPRE VLVPVLPPDP QQVTAWLAGL RGSRVDVRVP QRGDKRELAE 
TVRKNAEHAL MLHRTRRAGD LTTRSQALRE LQEALDLDTA PLRIECYDVS HTQGTYQSAS 
MVVFEDGLPR KGEYRSFSIR GPEGDGARDD TAAMYEVITR RFRRYLADRA RSGELELDLE 
SGEVDPQEEP AETKKRFAYP PNLVVVDGGP PQVAAAQRAL DDLGVTDVAL CGLAKRLEEV 
WVAHDDYPVI LERSSEGLYL LQRARDEAHR FAITQHRKRR SKGMTVSALD GVPGLGPARQ 
KALLTHFGSV KRLRAASVEE IASVRGMGTT TAQAVVAALA APQTPPTAPD ADPAGILAP