| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1518 |
|---|
| Symbol | |
|---|
| ID | 8649041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1651335 |
|---|
| End bp | 1653242 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 635 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003326106 |
|---|
| Protein GI | 269956317 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.529204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC ACAACCCCGG CGGCGGACCC GGCATGGGCG GCGGGCGCGG CCTGCGGTCC
TACATGCAGG ACTCTTCGGT TACCGAGCAC CACCTCACCC GCGCCACCCT GAAGCGGGTG
GTCGGGTTCG CGCGGCCCTA CCGACGTCGC CTCGCCGCGT TCCTCGGCCT GCTGGCGCTC
GACGCCGCCG CCGGCGCCGC CACCCCCCTG CTGTTCCGCG CGCTCATCGA CCACGGCATC
GCCGAGGGCG ACGTCCCGCT GGTCGCCTGG CTCGCCGCGG CGGCCGCCGG GATCGCGCTC
CTGTCCGCGG GCCTGCAGGT CGCGCAGCGC TGGATCTCCG CGACCATCGG CGAGGGCCTG
ATCGTCGACC TGCGCACCGC CGTCTTCGAC CACGTGCAGC GCATGCCGCT CGCGTTCTTC
GCCCGCACCC GCACCGGGGC GCTCGTCCAG CGGCTCAACG GCGACGTGCT GGGCGCCCAG
CAGGCCTTCA CCTCCACGCT CCAGAACGTC GTCTCCAACG GGCTCACCGT CGTCTTCACG
CTCGGGGCGA TGGCCGCGAT GTCGTGGCGG CTCACCCTCC TCGCGCTCGT CCTGGTACCC
GCGTTCGTGC TGCCCGCCCG CTACGTCGGG CGCCGGCTGG CCGCGCTCGC GCTGCGCAGC
CATGAGCTCA ACGCCGACGC CGCCCAGCTC ATGAACGAGC GCTTCAACGT CGCGGGCGCC
CACCTGGCCA AGGTGTTCGG CGACCCCGAC CGCGAGTCCC GCCTCTACGC CGAGCAGGTC
GTCAAGCAGC GCGACGTCGG CGTCACGCAG GCGCTGTGGG CCATGTGGTT CCGGGTCGGG
CTGGTCACGC TCGCGTCCGT GGCGATCGCC CTTGTGTACG GCCTCGGCGG CGTGCAGGCG
ATCCGCGGGG AGCTGACCGT CGGCGTCGTC GTCGCCCTCA CCGCGTTCCT CGGGCGGCTG
TACGGGCCGC TGACGGCGAT GAGCAACGTC CAGGTGGACA TCATGACGGC GCTCGTCTCC
TTCGAGCGGG TGCTCGAGGT GCTCGACCTC GAGCCCTCCG TCGCGCAGAA GCCCGACGCC
GCGGACCTGC GGAAGGCGGT CGCGGCACGC GGCGCCGCCA TCGCCGTGGA GGGCGTGACG
TTCCGCTACC CGAGCGCCGA CGAGGTGTCG CTCGCGTCGC TGGAGTCCGT CGCACAGCTC
CGCACCGACC CGACGACGGA CACTCTCATC GACGTCTCCT TCGAGGTGCC GGCCGGCGCG
ATGGTGGCGC TCGTGGGCCC GTCGGGCGCC GGCAAGACGA CAATCTCCCA GCTCGTGTCG
CGCATGTACG ACCCGACCTC CGGCGTCGTG CGCATCGCCG GGCTCGACCT GCGGGACGTC
ACGCTGGACT CGCTGCGGGC GACCGTCGGC GTCGTCTCGC AGGAGGCGCA CCTGTTCCAC
GACACCATCG CCGGCAACCT GCGGTTCGCG CGGCCCGAGG CGACCGACCT GGAGCTGGAG
GGCGCGCTAC GGGCCGCGCG CATCTGGGAC CTGGTCGCGT CGCTGCCCGA GGGGATGGAC
ACCGTCGTCG GCGACCGCGG CTACCGCCTC TCCGGCGGCG AGCGCCAACG TCTCGCCATC
GCGCGGTTGC TGCTCAAGGC GCCCGACGTC GTCGTCCTCG ACGAGGCGAC GGCGCACCTG
GACTCCGAGT CCGAGGCCGC CGTGCAGGCG GCGCTCGACG AGGCACTGAC GGGGCGGACG
TCGTTGGTGA TCGCCCACCG CCTGTCCACG GTGCGCGGGG CGGACCTCAT CGTGGTGCTC
GACGGCGGCC GCGTCGTCGA GCGCGGGACG CATGCGGAGC TGCTGGCCGA GAACGGGCTC
TACGCGGAGC TCTACCGGAC CCAGTTCGCG ACGACCGCCG GTGGTTGA
|
|---|
| Protein sequence | MTMHNPGGGP GMGGGRGLRS YMQDSSVTEH HLTRATLKRV VGFARPYRRR LAAFLGLLAL
DAAAGAATPL LFRALIDHGI AEGDVPLVAW LAAAAAGIAL LSAGLQVAQR WISATIGEGL
IVDLRTAVFD HVQRMPLAFF ARTRTGALVQ RLNGDVLGAQ QAFTSTLQNV VSNGLTVVFT
LGAMAAMSWR LTLLALVLVP AFVLPARYVG RRLAALALRS HELNADAAQL MNERFNVAGA
HLAKVFGDPD RESRLYAEQV VKQRDVGVTQ ALWAMWFRVG LVTLASVAIA LVYGLGGVQA
IRGELTVGVV VALTAFLGRL YGPLTAMSNV QVDIMTALVS FERVLEVLDL EPSVAQKPDA
ADLRKAVAAR GAAIAVEGVT FRYPSADEVS LASLESVAQL RTDPTTDTLI DVSFEVPAGA
MVALVGPSGA GKTTISQLVS RMYDPTSGVV RIAGLDLRDV TLDSLRATVG VVSQEAHLFH
DTIAGNLRFA RPEATDLELE GALRAARIWD LVASLPEGMD TVVGDRGYRL SGGERQRLAI
ARLLLKAPDV VVLDEATAHL DSESEAAVQA ALDEALTGRT SLVIAHRLST VRGADLIVVL
DGGRVVERGT HAELLAENGL YAELYRTQFA TTAGG
|
|---|
| |