Gene Xcel_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1500 
Symbol 
ID8649022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1626139 
End bp1627419 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content73% 
IMG OID 
Producttryptophan synthase, beta subunit 
Protein accessionYP_003326088 
Protein GI269956299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACG CCCTGTCGTC CACGCTCGCC CACCAGGTCC TGGGACGGCT GTCCGAACAG 
CCCGGCCCGT ACTTCGGCGA GTTCGGCGGA CGCTGGGTGC CCGAGGCGCT GATCGCCGCG
CTCGACGAGC TCGAGGTGGA GTACCGCAAG GCGGTCGAGG ACCCGGCGTA CACCGACGAG
CTGGCCCGCC TGCACCGTGA GTACGTGGGC CGCCCGTCGC CGCTGACCGA GGTCACCCGG
TTCGCGCAGC ACTGCGGCGG CGACGCCGGC AACCGCGTGT TCCTCAAGCG CGAGGACCTC
AACCACACCG GCTCGCACAA GATCAACAAC GTGCTGGGCC AGGCGCTGCT GGTCAAGCGC
ATGGGCAAGA CGCGCGTGAT CGCGGAGACG GGCGCAGGCC AGCACGGCGT CGCCACGGCG
ACGGCGGCCG CGCTGCTCGA CCTGGAGTGC GTCGTCTACA TGGGCGAGGA GGACACCAGG
CGCCAGGCGC TCAACGTGGC GCGCATGCGC CTGCTGGGCG CCACCGTCGT CCCCGTGACG
ATCGGGCAGC GCACGCTCAA GGACGCGATC AACGAGGCCC TGCGCGACTG GGTCGCCAAC
GTCGAGACGA CGCACTACCT GCTCGGCACC GTGACCGGCC CGCACCCGTT CCCCGAGATG
GTCCGCGAGC TGCACAAGAT CATCGGCGAG GAGGCCCGCG AGCAGATCCT CGAGCGCACC
GGCCGGCTGC CCGACGTCGC CGCGGCGTGC GTGGGCGGCG GGTCGAACGC GCTGGGCCTG
TTCAACGCGT TCCTCGACGA CCCGTCGGTC GCGCTGTTCG GCTTCGAGGC CGGCGGCGAG
GGCATCGAGT CGGGGCGGCA CGCGTCGCGC TTCCAGGGCG GCGTCCCCGG CGTCCTGCAC
GGCGCCCGCT CCTACCTGCT CCAGGACGAC GACGGCCAGA CGCTCCCGAG CCACTCGGTC
TCGGCCGGGC TGGACTACCC GAGCGTCGGC CCGGCCCACT CCTGGCTGCA CGACCTCGGC
CGCGCGACCT ACCGCCCGGT CACGGACGAC GAGGCCATGG AGGCCTTCCG GGTCCTGTGC
CGCACCGAGG GCATCATCCC CGCCATCGAG TCCGCCCACG CGCTCGCCGG GGCCATGCAG
GTCGGCACCG AGCTCGCCGC CGAGGGCAAG CGCGACCAGA TCATCCTGGT CAACCTGTCG
GGCCGTGGCG ACAAGGACGT GGCGACCGCC GCCCGCTGGT TCGGGCTGCT CGACGACGCC
ACCTCGGAGG GGGACCAGTG A
 
Protein sequence
MSDALSSTLA HQVLGRLSEQ PGPYFGEFGG RWVPEALIAA LDELEVEYRK AVEDPAYTDE 
LARLHREYVG RPSPLTEVTR FAQHCGGDAG NRVFLKREDL NHTGSHKINN VLGQALLVKR
MGKTRVIAET GAGQHGVATA TAAALLDLEC VVYMGEEDTR RQALNVARMR LLGATVVPVT
IGQRTLKDAI NEALRDWVAN VETTHYLLGT VTGPHPFPEM VRELHKIIGE EAREQILERT
GRLPDVAAAC VGGGSNALGL FNAFLDDPSV ALFGFEAGGE GIESGRHASR FQGGVPGVLH
GARSYLLQDD DGQTLPSHSV SAGLDYPSVG PAHSWLHDLG RATYRPVTDD EAMEAFRVLC
RTEGIIPAIE SAHALAGAMQ VGTELAAEGK RDQIILVNLS GRGDKDVATA ARWFGLLDDA
TSEGDQ