| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1488 |
|---|
| Symbol | |
|---|
| ID | 8649010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1613974 |
|---|
| End bp | 1614786 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | 20S proteasome A and B subunits |
|---|
| Protein accession | YP_003326076 |
|---|
| Protein GI | 269956287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC GAGGACGGCT CGGGGATGCG TTCCTGCGCC CCGGGTCGTC GTCGTTCCTC
GACTTCCTCT CCGACCACGC GCCCGAGCTG CTGCCCGGGC GTTCCGCCGC CGCGGGCAAC
GCACCGCTGG CGCCGCACGC CACCACGATC GTCGCCCTCA CGTTCCAGGA CGGCGTCGTC
ATGGCGGGCG ACCGGCGCGC GACGGCCGGC ACGATGATCG CGAGCCGCGA GATCGAGAAG
GTGTTCCCGG CGGACGACTA CTCCGTCATC GGGATCTCGG GCTCGGCGGG CATCGGGGTC
GACCTCGCGC GCCTCTTCCA GCTCGAGCTG GAGCACTACG AGAAGATCGA GGGCTCGTTG
CTGAGCCTCG ACGGCAAGGC GAACCGGCTC GGGACGCTGC TGCGCGGCAA CCTGCCGCTG
GCGATGCAGG GCTTCGTCGT CGTGCCGCTG TTCGGGGGCT ACGACCTCGA CCGCGGCGCC
GGGCGCATCT TCAGCTACGA CGCCACCGGG GGCCGGTACG AGGAGCACGA GCACCACGGC
ACGGGCTCCG GCGCGATCTT CGCGCGCGGC GCGCTCAAGA AGCTGTGGCG GCCGGGCATG
GACGCCGCCG AGGCCGTCAA GGTCGCCGTC GAAGCGCTGT ACGACGCCGC CGACGACGAC
GCGGCGACCG GCGGACCGGA CCCGGTGCGC CGCATCTGGC CGGTGGTGAC GACGGTGACG
GCCGCGGGCT ACCGGCGGGT GCCCGAGGAC GAGCTCGCCA CGCTGGTCGA CGCGCTGCTG
GCCGTCCGGA CCGAGAGAGG ACGCCTGGCA TGA
|
|---|
| Protein sequence | MSNRGRLGDA FLRPGSSSFL DFLSDHAPEL LPGRSAAAGN APLAPHATTI VALTFQDGVV
MAGDRRATAG TMIASREIEK VFPADDYSVI GISGSAGIGV DLARLFQLEL EHYEKIEGSL
LSLDGKANRL GTLLRGNLPL AMQGFVVVPL FGGYDLDRGA GRIFSYDATG GRYEEHEHHG
TGSGAIFARG ALKKLWRPGM DAAEAVKVAV EALYDAADDD AATGGPDPVR RIWPVVTTVT
AAGYRRVPED ELATLVDALL AVRTERGRLA
|
|---|
| |