| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1474 |
|---|
| Symbol | |
|---|
| ID | 8648996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1600430 |
|---|
| End bp | 1601746 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | peptidase M20 |
|---|
| Protein accession | YP_003326062 |
|---|
| Protein GI | 269956273 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.739931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC CGATCACCGC GTCCGACGAG GTCGCGCGCA TCTGCCAGGA CCTGCTGCGC
ATCGACACGT CCAACTTCGG TGACGACTCG GGGCCGGGGG AGCGGGTCGC GGCCGAGTAC
GTGGCCGAGC TGCTCACCGA CGTCGGCCTG GACGTCGAGG TCTTCGAGTC GCGCCCCGGC
CGCACCTCCG TGGTCACCCG GCTGGAGGGC ACGGACCCGT CCCGGCCGGC GCTGGTGCTG
CACGGCCACA CCGACGTCGT GCCCGCCCAG GCGGGCGACT GGAGCGTCGA CCCGTTCGGC
GGCGAGGAGA TCGACGGGCT GCTGTGGGGC CGCGGCGCCG TCGACATGAA GGACATGGAC
GCGATGATCC TGTCCGTCGT GCGGCAGTAC GTGCGCGAGG GCCGCAAACC CGCCCGTGAC
GTCGTCGTCG CGATGTTCGC CGACGAGGAG GCCGGCGGGG TGCACGGCGC CCAGTGGGCG
GTGCGGCACC GGCCCGAGCT GTTCGAGGGC GCCACCGAGG CCATCAGCGA GGTGGGCGGG
TTCTCCGTCG AGGTCGGCGG GCGGCGCGCC TACCTGCTCC AGACGGCGGA GAAGGGCCTG
GCCTGGCTGC GTCTGATCGC GGACGGCCGG GCCGGGCACG GGTCGGCCGT CAACCATGAC
AACGCGGTCA CCGCGCTCGC CGAGGCGGTC GCCCGCGTCG GGCGGCACTC GTGGCCGTAC
ACGCTCACCC CCACGGTCGA GCGGCTGCTG CGTGGCGTCG CGGACCTCAC CGGGCTTCCG
TTCGACGCCG AGGACCCTGC GTCGATCGAC ACCCTCGTGC GGGCGCTCGG CCCGGCCGCC
CCCTTCGTAG GCGCCACGGT GCGGCACACC GCCAACCCCA CCCAGCTCGC CGCCGGGTAC
AAGGCCAACG TCATCCCCGG GCGGGCCGAG GCGTCGGTCG ACGTCCGGCT GCTGCCCGGC
TACGAGGACG AGGGCATGGC CACGCTGCGC GAGCTCGTCG GCCCCGACGT GCGGATCGAG
CCGATCCACC AGGACGTCGC GCTCGAGGTG CCGTTCTCCG GCTCGCTCGT CGACGCCATG
GTCGACGCGC TCACGGCGGA GGACCCGGGC TCGGTGGTGC TGCCCTACAC GCTCTCGGGC
GGCACGGACA ACAAGTCGCT GTCCCGCCTG GGGATCACCG GCTACGGGTT CGCGCCGCTG
CGGCTGCCCG CCGACCTCGA CTTCGTGAGC ATGTTCCACG GCGTCGACGA GCGCGTTCCG
GTCGACGCGC TGCGGTTCGG CACGCGCGTG CTGGACCGGC TGCTCGCGAC CTGCTGA
|
|---|
| Protein sequence | MTAPITASDE VARICQDLLR IDTSNFGDDS GPGERVAAEY VAELLTDVGL DVEVFESRPG
RTSVVTRLEG TDPSRPALVL HGHTDVVPAQ AGDWSVDPFG GEEIDGLLWG RGAVDMKDMD
AMILSVVRQY VREGRKPARD VVVAMFADEE AGGVHGAQWA VRHRPELFEG ATEAISEVGG
FSVEVGGRRA YLLQTAEKGL AWLRLIADGR AGHGSAVNHD NAVTALAEAV ARVGRHSWPY
TLTPTVERLL RGVADLTGLP FDAEDPASID TLVRALGPAA PFVGATVRHT ANPTQLAAGY
KANVIPGRAE ASVDVRLLPG YEDEGMATLR ELVGPDVRIE PIHQDVALEV PFSGSLVDAM
VDALTAEDPG SVVLPYTLSG GTDNKSLSRL GITGYGFAPL RLPADLDFVS MFHGVDERVP
VDALRFGTRV LDRLLATC
|
|---|
| |