| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1456 |
|---|
| Symbol | |
|---|
| ID | 8648977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1580745 |
|---|
| End bp | 1581914 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | glycine oxidase ThiO |
|---|
| Protein accession | YP_003326045 |
|---|
| Protein GI | 269956256 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.307588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG ACGTCGTCGT CGTCGGCGCC GGGATCATCG GTGCGGCCGT CGCCTGGCGG
GCCGCGCAGG CCGGGCTGAC GGTCACGGTC CTCGACCCGG CACCCGGCTC CGGCGCGACG
CACGCGGCGG CCGGGATGCT GGCCCCCGCG GCGGAGGCAT GGTTCGGGGA GGCGGACGCG
ACCCGGCTCG GTCTCGCGGC GGTGGCCGCC TGGGACGGCT TCGCCATCGA CCTCGCCGCG
GCGACGGGGT CGGACGGCGG GCTGCGGGGG AGCGGTGCGC TGCTCGTCGC GTACGACGCC
GACGACGCCG CACAGCTGCG CCGGATCCTC GCGCTGCACG ACCGGTGGGA GCTCGGCTCG
GCGGAGCTGT CCGTCGCGGA AGCCCGGCGC ACCGAGCCGC TGCTCGGCCC GCGGGTCTCC
GGCGCGGCGT GGCTGGCCCC GGACCGGTCG GCCGATCCGC GCACCACGAC GGCGGCGCTG
CTCACCGCCC TGGAGGCGGA CGCGCGCGTC TCCGTCGTGC GGCGTGCCGC GGACAGGCTG
CTGACCCAGG CGGGCTGCGT CGTCGGCGTG CTGGACGACG ACGGCGGCGA GCATCGAGCC
GGGACGGTCG TGCTCGCGGC GGGGTGGCGT TCCGCCGCGC TCGTGGCGGA CCTGCCGGGC
GTGCCGGTGC CCGTGCGACC GGTGCGCGGG CAGACCCTGC GGCTCGACGC CGCACTCGGG
GAGGCGCCGT CGCACGTGGT GCGCGGGATC GTGCAGGGCA GGCCGATCTA CGTGGTGCCC
CGGGAGCCCG GCTCCGACGG GCGCCGCGAG GTGGTCGTCG GCGCCACCAG CGACGAAGGG
CCCGACGACG GCCGCCCCAC CGCGGGGGGC GCGTTCGCCC TGCTCCGCGA CGCACGGGCG
CTGCTCCCGG CGCTCGACGA GGCCGCCCTC GTCGAGATCA CGTCCCGGGC CCGGCCGGGC
AGCCCCGACA ACGCCCCGCT CGTCGGGCCG ACCGACGTGC CAGGGCTCGT CCTGGCCACG
GGGCACCACC GCAACGGGAT CCTGCTCGCA CCGATCACGG CGGAGGCCGT CGTCGCCCAC
CTCGTCGGCG CCCCGATGCC GGACGCCATG GCCGCCGCGG ACCCGCGCCG GTTCACACCC
CTCCATGCGA CCACCCGGAG CCTGTCGTGA
|
|---|
| Protein sequence | MSADVVVVGA GIIGAAVAWR AAQAGLTVTV LDPAPGSGAT HAAAGMLAPA AEAWFGEADA
TRLGLAAVAA WDGFAIDLAA ATGSDGGLRG SGALLVAYDA DDAAQLRRIL ALHDRWELGS
AELSVAEARR TEPLLGPRVS GAAWLAPDRS ADPRTTTAAL LTALEADARV SVVRRAADRL
LTQAGCVVGV LDDDGGEHRA GTVVLAAGWR SAALVADLPG VPVPVRPVRG QTLRLDAALG
EAPSHVVRGI VQGRPIYVVP REPGSDGRRE VVVGATSDEG PDDGRPTAGG AFALLRDARA
LLPALDEAAL VEITSRARPG SPDNAPLVGP TDVPGLVLAT GHHRNGILLA PITAEAVVAH
LVGAPMPDAM AAADPRRFTP LHATTRSLS
|
|---|
| |