Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1440 |
Symbol | |
ID | 8648961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1562634 |
End bp | 1564283 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003326029 |
Protein GI | 269956240 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCCCC CGACGCGTAC CGGCGTCCTG TGGGTGGCCG ACTGGCCGGT GGTCGCCGCG ATGGCCGTCG CGGGGGTGGA CGCGCACGTG CCCGCCGCGG TGCTCGCGCA CCAGGGCGTG GTGGCGGCGT CGGCGGTCGC ACGCTCGGCG GGGGTGCGCC GCGGCATGCG GCGCCGGGTC GCGCAGGAGC GCTGCCCCGA GCTGGTGCTG CTGGCCGCCG ACGACGCGCG CGACGCCCGC GAGTTCGAGC CGGTGGCGGT GGCGGCCGAG ACCGTCGTCG CGGGTGTCGA GGTCGCCCGA CCGGGGCTCC TGCTGCTGCC CGCCGACGGC GCCGCGCGCT ACCACGGCAC CGAGGCGGCG TTGGCGCAGG CCCTGGTCGA GGCCGTCGCT GGGGCGGGCT TCGAGCCGCA GGTGGGGGTG GCGGACGGCA TCCTCGCCGC GGTGCTCGCG GCACGCGAGG ACGCCGTCGT GCCGCCCGGC GGGTCGCGTG CGTTCCTCGC CCCACGACGA GCCGCGGACC TGCTGCACGC CGTCACGGAC CCGGGCAGCC TCGCGGCGGT GCGGGCCGCC GTCGACCTGT GGTGGCGGCT GGGCGTGCGC ACCCTCGGCG ACCTGGCCGC GCTGCCGGAG GTCGCGGTGC TCGGCCGGTT CGGTGACCTG GGCGCGTGGG CGCAGCGGCT CGCGCGCGGC GAGGACCTGC GCCCGCCCGC GCGCCGCCGC CCCGAGGAGG ACCTCGCCGT CGGCGCGGAC CTGGACCCGC CCGCGCTGCG CGTCGACGTG GCCGCCTTCG CCGCCCGCCG CCTCGCGGAG GAGCTGCACG CCCTGCTGTC GAGGCGAGGG CTGGCGTGCG GCCGCCTGCG CATCACCGCC CGCACCGAGG AGGCGGAGCT GGAGCGCGTC TGGCGCGTGG ACGACGCCGC AGCCGGCGGG CTGTCCGCCG CACGCATCAC CGACCGGGTG CGCTGGCAGC TCGAGGGCTG GCTGACGGCG TCGGCGCTAC GAGGGCGACG TGGCGGACCG GGGGAGGGCG ATGCCGAGCC CGCACCGGTC ACGCACCTGG CACTCACCGC CGAAGAGGTC GTACCCGCGG GCACCCACCA GCCGAGCCTG TGGGGTGCCG ATGCCGGTGG CGACACGCGC GCCCGCCGCG CGCTGGGCCG CGTGCAGGGC CTGCTGGGCG GCGACGCCGT GCTCACGGCG GCGCTCCAGG GCGGACGAGA CCCGCGCGAC CGTGTCCACC TGGCCCCCCT CGGCGAGCAC GTGCCGCGCC TGCGGGATCC CGGCCTGCCG TGGCCGGGTT CCCTGCCACC GCCCGCCCCG GCAACTCTGC TGCCGGAACC TCAGCCGGTG CGGCTCCTGA CCGGCGACGG CGCGGACGTC ACGGTGGACG CCCGCCTCGC CGTGGCAGCG CCGCCCGCAA CGGTGCAGGA ACCACCTGCC ACGGGAACCC ACCCGGCCGC GGTGCACGCC GTCATGGGAT GGGCCGGGCC GTGGCCGTTC GACGAGAGGT GGTGGGATCC TGCCGGTGCC CGGCGACGGG TGCTGCTCCA GGTGCTGCTC GACGACGGTC GAGGGCTGCT GCTCGCCTCC GGGGTGGGCA GCGGCGTCGG AAGCGATCCT GGCTGGTTCG TGGAGGCGGT CTATGACTGA
|
Protein sequence | MTPPTRTGVL WVADWPVVAA MAVAGVDAHV PAAVLAHQGV VAASAVARSA GVRRGMRRRV AQERCPELVL LAADDARDAR EFEPVAVAAE TVVAGVEVAR PGLLLLPADG AARYHGTEAA LAQALVEAVA GAGFEPQVGV ADGILAAVLA AREDAVVPPG GSRAFLAPRR AADLLHAVTD PGSLAAVRAA VDLWWRLGVR TLGDLAALPE VAVLGRFGDL GAWAQRLARG EDLRPPARRR PEEDLAVGAD LDPPALRVDV AAFAARRLAE ELHALLSRRG LACGRLRITA RTEEAELERV WRVDDAAAGG LSAARITDRV RWQLEGWLTA SALRGRRGGP GEGDAEPAPV THLALTAEEV VPAGTHQPSL WGADAGGDTR ARRALGRVQG LLGGDAVLTA ALQGGRDPRD RVHLAPLGEH VPRLRDPGLP WPGSLPPPAP ATLLPEPQPV RLLTGDGADV TVDARLAVAA PPATVQEPPA TGTHPAAVHA VMGWAGPWPF DERWWDPAGA RRRVLLQVLL DDGRGLLLAS GVGSGVGSDP GWFVEAVYD
|
| |