Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1432 |
Symbol | |
ID | 8648953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1553866 |
End bp | 1555851 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003326021 |
Protein GI | 269956232 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.590543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCC AGGACACCGC CGGGCGGCCG CCGCGCCGGA CCGGCCCCGG CCCCGGCCCG GGCGGCCCCA TGGGGATGGG CATGCCCGGC GACAAGGCGA TCCACTTCCA GCAGTCGCTG CTGCGGTTCG CCCGCTCGAT GCGGCCCGAG CGCGGCCGCG TCGTCGCGCT GATGCTGTGC GGCGTCGCGT CCGTGGCGCT CGCGGTCACC GGCCCGCGGA TCCTGGGGCA CGGCACGAAC ATCATCTTCG AGGGCGTGGT CGGCAAGCTG CTCGCCACCC AGTTCCCGCC CGGCACCACC GCCGAGCAGG CGGTCACCGC GCTGCGTGCG GCGGGCGAGG GGCGGCTCGC GGACATGCTC GCGGGCATGG GCACCGTCGT CGCCGGTCAG GGCATCGACT TCGACCGGCT CGGGCGGGTC CTGCTGGGCG TGCTGGCGAT CTACGGCGGC GCGTTCCTGT TCGGATGGCT GCAGGCCCGC ATCATGACGG TGGCCGTGCA GAACACCATG CGGCGGCTGC GCGACGAGGT CGAGGCCAAG CTGCACCGCG TGCCGCTCGG TTACGTGGAC AAGCAGCAGA AGGGCGAGAT CCTCTCCCGC GTCACCAACG ACATCGACAA CGTCGCGCAG ACGACGACGC AGACGCTCGC CCAGCTCGTC ACCTCGGTGC TGACCGTGGT CGGTGTGCTC GCGATGATGT TCTCGATCTC GTGGATCCTC GCGCTGGTCG CGCTCGTGAC AGTCCCGCTG TCGGTGTGGA TGACCGCGCG GATCGCGAAG CGGTCGCAGC CGCAGTTCGT CGCCCAGTGG GCCGCGACCG GGCGTCTCAA CGCGCACGTC GAGGAGATGT TCACCGGGCA CTCGCTCGTC AAGGTGTACG GGCAGCAGGA GGCCGCGGCC CAGAAGTTCG CCGTCGAGAA CGAGGCGCTG TTCGCGGCGT CGCAGAAGGC GCAGGCCATC AGCGGCACGA TCATGCCGTC CATGGGGTTC CTGGCGAACC TCAACTACGT CGTCGTCGCC GTCGTCGGCG GGCTGCGCGT GGCCTCCGGG CAGCTCTCGC TGGGCGACGT GCAGGCGTTC ATCCAGTACT CGCGGCAGTT CACCCAGCCG CTGACGCAGG TCGCGTCGAT GATGAACCTG CTGCAGTCGG GCGTGGCGTC GGCCGAGCGG GTCTACGCGC TGCTGGACGC ACCCGAGCAG ACCCCGGACC CGGCGTCGCC CACCGGCGTC GAGCAGGTCC GCGGGCGCGT CGCCTTCGAG GACGTCTCGT TCTCCTACGA CCCCGCCGCG CCGCTCATCG AGCACCTGGA CCTCGTGGCC GAGCCGGGGC AGACCGTCGC GATCGTCGGC CCCACGGGCG CCGGCAAGAC GACGCTGGTC AACCTGCTCA TGCGGTTCTA CGAGGTGGAC TCCGGCCGGA TCACGCTCGA CGGCGTCGAC ACGCGCACGA TGACGCGCGA CGCGCTGCGG TCCAGCATCG GCATGGTGCT CCAGGACACG TGGCTGTTCA AGGGCACCAT CGAGGAGAAC CTGCGCTACG GCGTCCGGCG GGACATCTCG CGCGAGGACT TCCTCGCGGC GACCCGCGCC ACGCACGTCG ACCCGTTCGT GCGGCACCTG CCGCAGGGTT ACGACACCGT GCTCGACGAC GACGGCACCG CGCTGTCCGT GGGCGAGAAG CAGCTGCTCA CCATCGCGCG GGCGTTCCTC GCCGACCCGG AGATCCTCGT GCTCGACGAG GCGACGAGCT CGGTGGACAC CCGCACCGAG GTGCTGGTGC AGCACGCGAT GAACGCGCTG CGCAGCGGAC GGACGTCGTT CGTCATCGCG CACCGGCTGT CCACGATCCG TGACGCCGAC GCGATCGTCG TCATGGAGCA CGGGCAGATC GTCGAGACGG GTGACCACGC CTCGTTGCTC GCGGCCGACG GCGCGTACGC GCGCCTCTAC CGGTCGCAGT TCGCGGCGCC GGTGGCGACG GAGTAG
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Protein sequence | MSAQDTAGRP PRRTGPGPGP GGPMGMGMPG DKAIHFQQSL LRFARSMRPE RGRVVALMLC GVASVALAVT GPRILGHGTN IIFEGVVGKL LATQFPPGTT AEQAVTALRA AGEGRLADML AGMGTVVAGQ GIDFDRLGRV LLGVLAIYGG AFLFGWLQAR IMTVAVQNTM RRLRDEVEAK LHRVPLGYVD KQQKGEILSR VTNDIDNVAQ TTTQTLAQLV TSVLTVVGVL AMMFSISWIL ALVALVTVPL SVWMTARIAK RSQPQFVAQW AATGRLNAHV EEMFTGHSLV KVYGQQEAAA QKFAVENEAL FAASQKAQAI SGTIMPSMGF LANLNYVVVA VVGGLRVASG QLSLGDVQAF IQYSRQFTQP LTQVASMMNL LQSGVASAER VYALLDAPEQ TPDPASPTGV EQVRGRVAFE DVSFSYDPAA PLIEHLDLVA EPGQTVAIVG PTGAGKTTLV NLLMRFYEVD SGRITLDGVD TRTMTRDALR SSIGMVLQDT WLFKGTIEEN LRYGVRRDIS REDFLAATRA THVDPFVRHL PQGYDTVLDD DGTALSVGEK QLLTIARAFL ADPEILVLDE ATSSVDTRTE VLVQHAMNAL RSGRTSFVIA HRLSTIRDAD AIVVMEHGQI VETGDHASLL AADGAYARLY RSQFAAPVAT E
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