Gene Xcel_1396 details

Gene Information

• Locus tag: Xcel_1396
• ID: 8648917
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 1522620
• End bp: 1523378
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 69%
• Product: ABC transporter related protein
• Protein accession: YP_003325985
• Protein GI: 269956196

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.471533
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCACGC TCGTCAACGC GACCAAGCGC TACGGCCGGA CGACGGTGCT GGACGACGTG 
ACCGTCTCGT TCGGCGGTGA GGGCATCACC GCACTGATCG GCCCGAACGG AGCCGGCAAG 
TCGACGCTGT TCGGCCTCGT CGGCCGGCTC ATCAAGCCCG ACCTGGGCCG GGTGGCCGTG 
GAGGGCAAGG ACGTCAGCAG CACGCCGTCC TCCGAGCTCG CGAAGGTGCT CGCCGTCCTG 
CGCCAGGACA ACCACATCGT CGCGCGGCTC ACGGTGCAGG ATCTCGTCGA GCTCGGCCGG 
TTCCCCCACT CGCGGGGGCG GCTCACCGTC GCGGACCGCG AGCACATCGA GCGGGCGATC 
GACTACCTCG ACCTGGGGGA GTACCGCGAC CGGTTCCTCG ACGAGCTGTC AGGGGGCCAG 
CGGCAGCGCG CCTTCATCGC GATGGTGCTC GCACAGGACA CGAGGTACGT GCTGCTGGAC 
GAGCCGCTCA ACAACCTCGA CCTGCGCCAC ATGACCGAGA TCATGAAGCT CGTGCGGCGG 
ATGGCCGACG AGCTCGGCAA GCGCGTGATC GTGGTGCTGC ACGACATCAA CTTCGCCGCG 
ACGTACGCCG ACCGGATCGT CGCGATGCGT GACGGGCGGA TCGTCGCGGA CGCGACGCGC 
GACGAGATCA TGCGCCCGGA GGTGCTGCAC GCGGTGTACG ACACGACGGT CGACGTGCGC 
GAGATCGACG GCAGGCCCGT CGCGCTCTAC TACGGCTGA 

 

Protein sequence

MITLVNATKR YGRTTVLDDV TVSFGGEGIT ALIGPNGAGK STLFGLVGRL IKPDLGRVAV 
EGKDVSSTPS SELAKVLAVL RQDNHIVARL TVQDLVELGR FPHSRGRLTV ADREHIERAI 
DYLDLGEYRD RFLDELSGGQ RQRAFIAMVL AQDTRYVLLD EPLNNLDLRH MTEIMKLVRR 
MADELGKRVI VVLHDINFAA TYADRIVAMR DGRIVADATR DEIMRPEVLH AVYDTTVDVR 
EIDGRPVALY YG