Gene Xcel_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1343 
Symbol 
ID8648864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1464371 
End bp1465585 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content71% 
IMG OID 
ProductThiamin pyrophosphokinase catalytic region 
Protein accessionYP_003325932 
Protein GI269956143 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGA TGAAGCTCAT TCCTCGCAGG TCAGGCGACA GCACCGGGCG TTCCCGGGAG 
GGTGACGGTG CCGGGTCGGT CACCTATGGC CCGGCCCGGG TCGGCACACG GACCAAGGAC
CTGACCAAGC GACTCGTCCC CGGCGACGTC GCGGTCATCG ACCACGTCGA CATCGACCGG
GTGGCCGCCG ACGCCCTCGT CGCCGCCCGC CCGGCCGCCA TCCTCAACGC GGCCCGTTCG
ACGTCGGGCC GCTACCCGAA CGCCGGGCCG GGCATCCTGC TCGAGGCAGG CATCGTCCTG
GTCGACGACC TGGGGCCGAG CATCATGTCG GTGCCCGACG GGGCTGCGGT CGAGATCCAC
GGCGGGCGCA TCGTCGTGGG CGGCCGGACC GTGGCCGAGG GCGTCAGCCA GACCGTGGAG
ACGAACGAGG CGAACCTCCT GGAGGCCCGG GACGGCCTCG GCGCGGAGAT CGAACGCTTC
GCCGAGAACA CCCTCGCGTA CCTGCGGCGC GAGAAGGACC TGCTGCTCGA CGGCGTCGGC
GTGCCGAACG TACGCACCGT GTTCGACGGA CGTCACGTCC TCATCGTCGT GCGCGGCTAT
CACTACCGCG AGGACCTCGC GATGCTGCGC CCATACATCA CCGAGAACCG GCCGCTGCTC
GTCGGCGTGG ACGGCGGGGC GGACGCGATC CTGGACGCCG GATACAAGCT CGACATGATC
GTCGGCGACA TGGACTCGGT GTCCGACAAG GCGCTCGCCT GCGGGGCGGA GATCGTGGTG
CACGCGTACC GCGACGGCAA CGCGCCGGGC CTCGAACGTG TCACGGCGCT CGGCGTCGAA
CCCGTCGTGT TCCCCGCGAC CGGCACGTCC GAGGACATCG CGATGCTGCT CGCCGACGAC
AAGGGCGCCG AGCTCATCGT CGCCGTCGGC ACGCACGCCA CCCTGGTCGA GTTCCTCGAC
AAGGGACGCG CGGGCATGGC CAGCACCTTC CTGACCCGCC TGCGCGTCGG TGGCAAGCTC
GTCGACGCCA AGGGCGTCTC GCGGCTGTAC CGCACCCGCA TCTCGAACAT CCAGCTCACG
CTGCTGTCCC TCGCCGGCGT GGCGGCCGTG GCGGCCGCGC TGTGGTCGAC GAAAGCCGGA
CAGACCTTCT TCGGCCTGGT CGGCGCCCGG TTCGACGACT TCCTCTCGTG GGTGGCCCGC
CTGTTCGGCG GCTGA
 
Protein sequence
MSAMKLIPRR SGDSTGRSRE GDGAGSVTYG PARVGTRTKD LTKRLVPGDV AVIDHVDIDR 
VAADALVAAR PAAILNAARS TSGRYPNAGP GILLEAGIVL VDDLGPSIMS VPDGAAVEIH
GGRIVVGGRT VAEGVSQTVE TNEANLLEAR DGLGAEIERF AENTLAYLRR EKDLLLDGVG
VPNVRTVFDG RHVLIVVRGY HYREDLAMLR PYITENRPLL VGVDGGADAI LDAGYKLDMI
VGDMDSVSDK ALACGAEIVV HAYRDGNAPG LERVTALGVE PVVFPATGTS EDIAMLLADD
KGAELIVAVG THATLVEFLD KGRAGMASTF LTRLRVGGKL VDAKGVSRLY RTRISNIQLT
LLSLAGVAAV AAALWSTKAG QTFFGLVGAR FDDFLSWVAR LFGG