| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1330 |
|---|
| Symbol | |
|---|
| ID | 8648848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | + |
|---|
| Start bp | 1443830 |
|---|
| End bp | 1445122 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | acetylornithine and succinylornithine aminotransferase |
|---|
| Protein accession | YP_003325919 |
|---|
| Protein GI | 269956130 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0110567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC TCCTCGCCCT GACGGAGCCC GGCTCCGTCG CCGCCGGCTT CTCGGCCCAG
TGGACGGACC GCTACACGCA TGCGGTCATG GACACGTTCG GCCCGCCGCA GCGCGTCCTG
GTGCGCGGCG AGGGCTGCTA CGTCTGGGAC GCGGACGGCA AGCGGTACCT CGACCTGCTC
GCGGGCATCG CGGTCAACGC GCTCGGGCAC GCGCACCCCA CGCTCACCGC CGCGATCAGC
GCGCAGCTCG GCACGCTCGG GCACGTGTCC AACTTCTTCG GCACGCCCAC GCAGATCGCG
CTCGCCGAGT CGCTGCTGCG TCTCGCGCAG GCACCGGACG GCTCGCGGGT CTTCCTCACC
AACTCGGGCA CCGAGGCGCT CGAGGCGGCG TTCAAGATGA CCCGCCGGGT GGGCCCGGGC
CGGGTGCTCG CCCTGGAGGG CGCGTTCCAC GGCCGCTCGA TGGGGGCGCT CGCGCTGACC
CACAAGCAGG CCTACCGCGA GCCGTTCGAG CCGCTGCCAG GCGGCGTCGA GCACGTCGCC
TTCGGTGACA CGACGGCGCT GGACGAGGCG TTCTCGCCGG CCGCGGTCGC CGAGCGCGGA
CCCGTCGTCG CCCTCGTCGT CGAACCACTC CAGGGCGAGG CGGGCGTGCG CCCGCTGCCG
CCCGGCTACC TCGCGCACGC CCGCCGCCTC ACCTCCGACG CCGGGGCGCT GCTGATCCTG
GACGAGGTGC AGACCGGCGT CGGGCGCACC GGGTCCTGGT TCGCCTACCA GCACCCGGAG
ATCGGCGGCG GCATCGTGCC CGACGTCGTC ACGCTCGCCA AAGGGCTGGG CGGCGGGTTC
CCGGTCGGCG CGGTGATCGC CTACGGCGAG CGCGCCGCGA CCCTGCTCGG CCGCGGGCAG
CACGGCTCCA CCTTCGGCGG CAACCCCGTG GCCGCGGCGG CAGCGCTCGC CACGCTCGGC
GTCATCGAGC GCGACGGCCT GCTCGGCCAG GTCCACGACG TCGGCGCCCT GCTGCGCGAG
GAGATCGAGC TGTGCGGGTC GCCGCTGGTG CGCGAGGTGC GCGGTCGCGG CCTGCTGCTC
GCCGTCGTCC TCAACGCCCC CGTGGCCGCG CAGGTCGCCG CGCAGGCGCT CGAAGCCGGG
TTCGTGATGA ACCCCGTGGC GCCCGACGCG GTCCGGCTCG CGCCACCGCT GATCCTCACC
GCCGAGCAGG CTCGCGAGGT GGCCGGGTTC TTCGCCACAC TGTCCCTGCC CACCGAGCCC
GCCGACGTGC CCACCGAAGG GGAGACCCGA TGA
|
|---|
| Protein sequence | MSDLLALTEP GSVAAGFSAQ WTDRYTHAVM DTFGPPQRVL VRGEGCYVWD ADGKRYLDLL
AGIAVNALGH AHPTLTAAIS AQLGTLGHVS NFFGTPTQIA LAESLLRLAQ APDGSRVFLT
NSGTEALEAA FKMTRRVGPG RVLALEGAFH GRSMGALALT HKQAYREPFE PLPGGVEHVA
FGDTTALDEA FSPAAVAERG PVVALVVEPL QGEAGVRPLP PGYLAHARRL TSDAGALLIL
DEVQTGVGRT GSWFAYQHPE IGGGIVPDVV TLAKGLGGGF PVGAVIAYGE RAATLLGRGQ
HGSTFGGNPV AAAAALATLG VIERDGLLGQ VHDVGALLRE EIELCGSPLV REVRGRGLLL
AVVLNAPVAA QVAAQALEAG FVMNPVAPDA VRLAPPLILT AEQAREVAGF FATLSLPTEP
ADVPTEGETR
|
|---|
| |