| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1305 |
|---|
| Symbol | |
|---|
| ID | 8648823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1419874 |
|---|
| End bp | 1422174 |
|---|
| Gene Length | 2301 bp |
|---|
| Protein Length | 766 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent DNA helicase, RecQ family |
|---|
| Protein accession | YP_003325894 |
|---|
| Protein GI | 269956105 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.572742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCGGG GCCTCATCGA CACCGTGGGC CCCGACGGTG AGGCCACCGG GTCGACGCTG
CGCGGCGAGG CCGAGGCCGC CCTGCGCTCG CTGGTCGGCC GCGACGACGC CGTGCTGCGC
GAGGACCAGT GGCGGGCGAT CGAGGCGCTG GCCGCGTTCC GCCGTCGGGC GCTGGTGGTG
CAGCGCACCG GGTGGGGCAA GTCGGCCGTG TACTTCGTGG CGACGTCGCT GCTGCGCGCC
CGCGGCGCGG GGCCGACGGT GATCATCTCG CCGCTGCTGG CCCTCATGCG CGACCAGATC
GCGGCGGCCG CCCGTGCCGG GATCCGGGCG GTGACGATCA ACTCGGCCAA CGTCACCGAG
TGGGAGTCCG TGCACGCGCA GATCGCGGCC GGCGAGGTCG ACGTGCTGCT GTGCTCCCCC
GAACGCCTCA ACAACCCCGG GTTCCGCGAC GAGGTGCTGC CGCGCCTCGC CGCCGACGCC
GGCCTCGTCG TCGTCGACGA GGCCCACTGC ATCTCCGACT GGGGCCACGA CTTCCGCCCG
GACTACCGCC GCATCCGCAC CCTGCTCGCC GACCTCCCGC CCGGCATCCC GGTGCTCGCG
ACGACGGCGA CGGCCAACGA GCGGGTGACG CGCGACGTCG CGGAGCAGCT CGCCGTGCAC
GCCTCCGGGC TGCCGGACAC CGACGTGCTG GTGCTGCGCG GGCCGCTCGA CCGGGAGTCG
CTGCACCTGG CGGTGCTCGA GCTGCCGGAC CAGCCGACCC GGGTGGCGTG GCTCGCCGAG
GCCCTCCAGG ACATCGAGGG GTCCGGCATC GTCTACTGCC TGACCGTGTC GGCCGCCGAG
CAGGTGGCCG AACAGCTGCG TGCGGCCGGG CTCGCCGTCG CCGCGTACAC CGGGCGCACC
GACCCGACGC AGCGCGAGGC GCTCGAGGCG GACCTCAAGG AGAACCGGGT CAAGGCGCTG
GTCGCGACGT CGGCGCTCGG CATGGGGTTC GACAAGCCCG ACCTCGGGTT CGTGGTCCAC
CTGGGCGCGC CGTCCTCCCC CATCGCGTAC TACCAGCAGG TCGGGCGCGC GGGCCGTGGC
GTGGACTCCG CCGTCGTCGT CCTGCTGCCC GGGCAGGAGG ACCGCGCGAT CTGGGACTGG
TTCGGGGCTC AGGCGTTCCC GGCCGAGGGG CAGGTGCGCG CGACGCTCGC GGCGCTGGAG
GCCGCCGACG GTCCGCTGTC GACCCCGGCG CTCGAACCGC TCGTCGACCT CAAGCGGTCG
CGACTCGAGA CGATGCTCAA GGTGCTCGAC GTCGACGGCG CCGTGCGGCG CGTGCAGGGC
GGGTGGACCG CCACGGGGCG GCCGTGGGCG TACGACGCCG AGCGGTACGC GCGGGTGGCC
GCGACGCGCG AGGCCGAGCA GCAGGCGATG GTCGAGTACG TCCGCACGTC CGGGTGCCGG
ATGGCGTTCC TGCGGCGGCA GCTCGACGAC CCGGAGCTCG CCGGCGGGGG CGCCGAGTCC
GCCGCATGGC GGTGCGGGCG CTGCGACCGC TGCGGCGGCG TCGCCCTGCC GGACGCCCCC
GACGCCGAGG CCGTGGCCGC CGCGCGGCAC GAGATGGACC GGCCGGGAGT CGAGGTCGAG
CCGCGCAAGC TGTGGCCGTC CGGCCTCGCG GCGCTGGGGC TGGACCTGCG CGGACGGCTC
GCCGCGGGCG AGCTCGCCGA ACCGGGCCGC GCGATCGCCC GCCTCGACGG GCTCGGCTGG
TCCGGGCCGC TGCGGGATCT GCTCGCCCCC GGGGCGCCCG ACGGCGAGCT GCCCGTGCCG
CTGCGCCGGG CGGCCGCACG GGTGCTGGAC GACTGGGCGG CGCTGCGCGC GTCGTCCGGT
GACGACGCCG ACTCCGGGCC TTCGGAGGAT GCGGCCGGCT TCTCGCCGGA AGGCGAGGCC
GCCGACGTCG CGGACGCGAG GCCACCGCTG CGGATCGAGG CGGTCGTGGC CGTCCGCTCG
GTCACCCGAC CCCAGCTCAC CTTCCACCTG GCCGACGGGC TGGCCCGCTA CCTGGGCGTC
CCGATGATCG GCGCGGTCGG CCCGGCCGCC GGACACGAGA CGCCCGGACG GCACGACCTG
AACTCGGCGA TGCGCCTCGC GGGCGTCGCA CAGCGGCTCG AGCTGCAGCT CTCCGAGCCT
GCCCTGCACG GGCTGCCGGG CCGGTCCGTG CTGCTGGTCG ACGACTGGAC CGAGTCCGGC
TGGACGCTCA CGGTCGCCGC CCGCCTGCTG CGGCAGGCCG GTGCGGCGCG GGTGTTCCCG
TTCGTGCTCG GGATCCGGTG A
|
|---|
| Protein sequence | MLRGLIDTVG PDGEATGSTL RGEAEAALRS LVGRDDAVLR EDQWRAIEAL AAFRRRALVV
QRTGWGKSAV YFVATSLLRA RGAGPTVIIS PLLALMRDQI AAAARAGIRA VTINSANVTE
WESVHAQIAA GEVDVLLCSP ERLNNPGFRD EVLPRLAADA GLVVVDEAHC ISDWGHDFRP
DYRRIRTLLA DLPPGIPVLA TTATANERVT RDVAEQLAVH ASGLPDTDVL VLRGPLDRES
LHLAVLELPD QPTRVAWLAE ALQDIEGSGI VYCLTVSAAE QVAEQLRAAG LAVAAYTGRT
DPTQREALEA DLKENRVKAL VATSALGMGF DKPDLGFVVH LGAPSSPIAY YQQVGRAGRG
VDSAVVVLLP GQEDRAIWDW FGAQAFPAEG QVRATLAALE AADGPLSTPA LEPLVDLKRS
RLETMLKVLD VDGAVRRVQG GWTATGRPWA YDAERYARVA ATREAEQQAM VEYVRTSGCR
MAFLRRQLDD PELAGGGAES AAWRCGRCDR CGGVALPDAP DAEAVAAARH EMDRPGVEVE
PRKLWPSGLA ALGLDLRGRL AAGELAEPGR AIARLDGLGW SGPLRDLLAP GAPDGELPVP
LRRAAARVLD DWAALRASSG DDADSGPSED AAGFSPEGEA ADVADARPPL RIEAVVAVRS
VTRPQLTFHL ADGLARYLGV PMIGAVGPAA GHETPGRHDL NSAMRLAGVA QRLELQLSEP
ALHGLPGRSV LLVDDWTESG WTLTVAARLL RQAGAARVFP FVLGIR
|
|---|
| |