Gene Xcel_1296 details

Gene Information

• Locus tag: Xcel_1296
• ID: 8648814
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 1409496
• End bp: 1413041
• Gene Length: 3546 bp
• Protein Length: 1181 aa
• Translation table: 11
• GC content: 69%
• Product: DNA polymerase III, alpha subunit
• Protein accession: YP_003325885
• Protein GI: 269956096

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCTGCGA CCGACGAGTT CGTCCACCTC CACGTCCACT CCGAGTTCTC TATGCTCGAC 
GGCGCGGCGC GCATCGGCGA GCTCGTGGAC GAGGTGGCGG CGCAGGGGCA GAAGGCCGTC 
GCGATCACCG ACCACGGGTA CCTCTTCGGG GCCTTCGAGT TCTGGAAGAC GGCGACGAAC 
AAGGGCGTCA AGCCGATTAT CGGCGTCGAG GCCTACGTCA CCCCGGGCAC CAGCCGGTTC 
GACCAGAAGC GCCAGCTGTA CGGCCAGCCG CTGCCCGACG GGCGCCCTGA CCCCGACGAC 
GTCTCGGCCC GCGGTGCGTA CACCCACATG ACGCTGTGGG CGCGGGACAA CGTCGGCATG 
CACAACCTGT TCCGGGCGTC GTCGCTGGCC TCGCTCGAAG GGCAGATGGG CAAGTGGCCG 
CGCATGGACC GCGACCTGCT CCAGCGCTAC TCGCCGGGGC TGACGGCGAC GACGGGCTGC 
CCGTCCGGGG AGATCCAGAC CCGGCTGCGC CTGGGGCAGT GGGAGGAGGC GCTGCGCGCC 
GCGGGTGAGC TGCAGGACCT CTTCGGGCGC GAGCACTTCT ACGTCGAGCT CATGGACCAC 
GGGCTCGAGA TCGAGACCCG GGTGACGAAG GACCTGCTGC GGCTCGCACA GGAGATCGGT 
GCCCCGATCG TCGCGACGAA CGACCTGCAC TACGTCAAGG AGGCCGACGC GACGAGCCAG 
GAGGCCCTGC TCGCGATCAA CTCGGGCTCC ACGCTCGACG ACCCGAACCG CTTCAAGTTC 
GACGGCACCG GCTACTACGT GAAGTCGTCC GCCGAGATGG CGCGCCTGTT CCGCGAGCTG 
CCCGAGGCGA TCTCCAACAC GCTGCTCATC GCCGAGTCGT GCGAGGTCTC GTTCGACACC 
CAGGCGAACT ACATGCCGCA CTTCCCCGTG CCCGACGGGG AGGACGAGAT CTCGTGGTTC 
GTCAAGGAGG TCGAGAACGG CCTGCGCCGC CGCTACCCGG ACGGCATCCC GGACGACGTG 
CGCACGCGCG CCGACTACGA GGTCGGCGTG ATCATCCAGA TGGGGTTCCC CGGCTACTTC 
CTCATCGTCG CCGACTTCAT CAACTGGTCG AAGCGCAACG GCATCCGCGT CGGCCCTGGC 
CGTGGCTCCG CCGCCGGGTC GATGGTCGCC TACGCGATGG GCATCACCGA GCTGGACCCG 
ATCCCGTACG ACCTGCTGTT CGAGCGGTTC CTCAACCCCG AGCGCGTGTC CATGCCCGAC 
GTCGACGTCG ACTTCGACGA GCGCCGGCGC GGTGAGGCCA TCCGGTACGT CACGGAGAAG 
TACGGCGACG ACCGGGTGGC CCAGATCGTC ACGTACGGCA CGATCAAGGC CAAGCAGGCC 
ATCAAGGACT CGGCCCGCCT GCTCGGCCAG CCGTTCGCGA TGGGCGAGAA GCTCACCAAG 
GCGATGCCGC CCGCGGTGAT GGGCAAGGAC ATCCCGCTGT CCGGCATCTT CGACCCGAAG 
CACCCGCGCT ATGCGGAGGC GGCCGAGTTC CGCCAGGTGC ACGACGTCGA CCCGGAGGCG 
CAGCGCGTCG TCGAGCTCGC GCGCGGCATC GAGGGCCTGA AGCGGCAGTG GGGCGTCCAC 
GCCGCCGGCG TCATCATGTC CAGCGAGCCG CTGATCGACA TCATCCCGAT CATGAAGCGC 
CCGCAGGACG GCGCCGTCAT CACGCAGTTC GACTACCCGA CGTCCGAGGG CCTCGGCCTG 
ATCAAGATGG ACTTCCTCGG GCTGCGCAAC CTGACGATCC TCGACGACGC GCTCGAGAAC 
ATCGTGGGCA ACGGCAAGGA GCCCGTCGAG ATCGAGAAGG TCGGTCTCGA CGACCCCACC 
ACCTACGAGC TGCTGGCCCG CGGCGACACC CTCGGGGTGT TCCAGCTCGA CGGCGGGCCC 
ATGCGCGCGC TGCTGCGGCA GATGCGGCCG GACAACTTCG AGGACGTCTC CGCCGTCATC 
GCGCTGTACC GCCCAGGCCC CATGGGCATG AACTCGCACA CGAACTACGC GCTGCGCAAG 
AACGGGCTCC AGCAGAACAC CCCGATCCAC CCCGAGCTGG CGGAACCGCT CGCGGAGGTG 
CTCGACACCA CCTACGGCCT GATCGTGTAC CAGGAGCAGG TGCAGCGTGC CGCGCAGGTG 
CTGGCCGGCT ACTCGCTCGG CCAGGCCGAC CTGCTGCGCC GCGCGATGGG CAAGAAGAAG 
AAGGAGATCC TCGACAAGGA GTTCGTCCCC TTCCAGGCGG GCATGCGCGA GCGCGGCTAC 
TCCGACGCGG CCATCCAGGC CGTGTGGGAC GTGCTGGTGC CGTTCGCCGG GTACGCGTTC 
AACAAGGCGC ACTCCGCCGG GTACGGCCTC GTCTCGTACT GGACCGCGTA CCTCAAGGCC 
AACTACCCGG CCGAGTACAT GGCGGCACTG CTCCAGTCCA CGCGAGAGGA CAAGGACAAG 
CTCGCCCTCT ACCTCAACGA GTGCCGCCGC ATGGGCATCA CGGTGCTCCC GCCCGACGTC 
AACGTCTCCG CGGCCAAGTT CACCGCCGTC GGCAAGGACG TGCGGTTCGG CCTCTCCGGC 
GTGCGGAACG TCGGCGCCAA CGTCGTCGAC GCCATCGTGC GCACGCGCGA GGAGAAGGGC 
GCGTACACGT CCTTCACCGA CTTCCTCGAC AAGGTCCCGG CCGTGGTCTG CAACAAGCGG 
ACCATCGAGT CGCTCATCAA GGCCGGCGCG TTCGACTCGC TCGAAGCCTC GCGCCGCGCG 
CTGCTCGTGG TGCACGAGCA GGCCGTCGAC TCCGTCATCA CGGTCAAGCG CAAGGAGGCC 
GAGGGGCAGT TCGACCTGTT CGCGGGCTTC GGTGGTGACG ACGACGACGC CGGGATGTCG 
TTCAGCGTCG ACGTGCCCGA CCTGCCCGAC TGGGACAAGA AGCAGAAGCT CGCGTTCGAG 
CGCGAGATGC TCGGCCTCTA CGTCTCCGAC CACCCGCTGT CGGGCCTCGA GCACGTGCTC 
ACCCGTGCCG CCGACACCTC GATCGCGACC CTGATGGGCG ACGAGGGACG GCCGGAGAAC 
TCGACCGTCA CGGTGGCCGG CCTCATCACC AGCCTGCAGC GCAAGATGTC GAAGAACGGC 
AACCCGTGGG CGGCCGTCAC CGTCGAGGAC CTCGAGGGCT CGGTCGAGGT GATGTTCTTC 
GGCGAGACGT ACCTGGCGTA CTCCACGGCG CTCGCGGAGG ACCAGGTGGT CGCCGTGCGC 
GGCCGGGTGC GGCGCCGCGA CGACCAGCTC TCGCTGCAGG CCATGGAGGT CTCCCTGCCC 
GACACCTCCG CCGTCGCCGA CGCGCCCGTG CAGGTCTCCG TGCCGCACAC GCGGTGCGTC 
GAACCGGTCA TGGTCAAGCT GCGCGAGGTG CTCGGCGCCC ACCCGGGGTC CGCGGAGGTG 
CACCTGACCG TCGTCGAGCC CGGGAAGCGG ACGGTGATCC GTGCCGCCGA CACGCTGCGG 
GTCGAGAAGT CCCCGGCCCT CTTCGGCGAC CTCAAGGCAC TCCTGGGACC CGCATGCCTC 
GGGTGA 

 

Protein sequence

MPATDEFVHL HVHSEFSMLD GAARIGELVD EVAAQGQKAV AITDHGYLFG AFEFWKTATN 
KGVKPIIGVE AYVTPGTSRF DQKRQLYGQP LPDGRPDPDD VSARGAYTHM TLWARDNVGM 
HNLFRASSLA SLEGQMGKWP RMDRDLLQRY SPGLTATTGC PSGEIQTRLR LGQWEEALRA 
AGELQDLFGR EHFYVELMDH GLEIETRVTK DLLRLAQEIG APIVATNDLH YVKEADATSQ 
EALLAINSGS TLDDPNRFKF DGTGYYVKSS AEMARLFREL PEAISNTLLI AESCEVSFDT 
QANYMPHFPV PDGEDEISWF VKEVENGLRR RYPDGIPDDV RTRADYEVGV IIQMGFPGYF 
LIVADFINWS KRNGIRVGPG RGSAAGSMVA YAMGITELDP IPYDLLFERF LNPERVSMPD 
VDVDFDERRR GEAIRYVTEK YGDDRVAQIV TYGTIKAKQA IKDSARLLGQ PFAMGEKLTK 
AMPPAVMGKD IPLSGIFDPK HPRYAEAAEF RQVHDVDPEA QRVVELARGI EGLKRQWGVH 
AAGVIMSSEP LIDIIPIMKR PQDGAVITQF DYPTSEGLGL IKMDFLGLRN LTILDDALEN 
IVGNGKEPVE IEKVGLDDPT TYELLARGDT LGVFQLDGGP MRALLRQMRP DNFEDVSAVI 
ALYRPGPMGM NSHTNYALRK NGLQQNTPIH PELAEPLAEV LDTTYGLIVY QEQVQRAAQV 
LAGYSLGQAD LLRRAMGKKK KEILDKEFVP FQAGMRERGY SDAAIQAVWD VLVPFAGYAF 
NKAHSAGYGL VSYWTAYLKA NYPAEYMAAL LQSTREDKDK LALYLNECRR MGITVLPPDV 
NVSAAKFTAV GKDVRFGLSG VRNVGANVVD AIVRTREEKG AYTSFTDFLD KVPAVVCNKR 
TIESLIKAGA FDSLEASRRA LLVVHEQAVD SVITVKRKEA EGQFDLFAGF GGDDDDAGMS 
FSVDVPDLPD WDKKQKLAFE REMLGLYVSD HPLSGLEHVL TRAADTSIAT LMGDEGRPEN 
STVTVAGLIT SLQRKMSKNG NPWAAVTVED LEGSVEVMFF GETYLAYSTA LAEDQVVAVR 
GRVRRRDDQL SLQAMEVSLP DTSAVADAPV QVSVPHTRCV EPVMVKLREV LGAHPGSAEV 
HLTVVEPGKR TVIRAADTLR VEKSPALFGD LKALLGPACL G