| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_1262 |
|---|
| Symbol | |
|---|
| ID | 8648780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 1371903 |
|---|
| End bp | 1374176 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | Superfamily I DNA and RNA helicase-like protein |
|---|
| Protein accession | YP_003325851 |
|---|
| Protein GI | 269956062 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.188499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGCA GGCAGGACGA GCTGGCGCAC GAGCAGGCCG TCGTCGACGA GCTGTACGCC
CGCCTCGACG AGCTCCGCTC CCGCGCGCGG GGCCGGCTGC GTGCCGTGCG CCGCGAGGGG
CCGTCGGGCT CCCCCCAGAA CCGCTCCGAG CGCGACGCGT TCGCCACGCT CTACGAGGAC
CGCGCGGCGC AGCTCGACGC CGTCGAGGAC CGCCTCGCGT TCGGACGCCT CGACCTCGAC
GAGGGCACCG TGCGGTACGT GGGGCGCATC GGCCTCACCG ACGACGAGCA GCGCTCGATG
CTCACCGACT GGCGGGCGCC CGCCGCCGAG GCGTTCTACC GCGCGACGGC GCTGCGCCCG
GCCGGCGTAC GTCGTCGTCG GCACCTGGTC ACCGCGGGCC GCAAGGTCAC CGGCGTCGAG
GACGAGCTGC TGGACCTGAC GGGCGCCGAC GACGGTGACC TCGACGCGTC CTCGCTCTCC
GGCGAGGGCG CGCTGCTGGC GGCGCTGGCC ACGCGCCGCA CGGGCCGGAT GTCGGACATC
GTCGCCACCA TCCAGGCCGA GCAGGACCGC ATCATCCGCT CGGACCTCGC GGGTGCGCTG
GTGGTCCAGG GCGGCCCTGG CACCGGCAAG ACGGCCGTTG CGCTGCACCG GGCCGCCTAC
CTCCTCTACG CGCACCGGCG CACGCTGGAG AAGGCGGGCG TGCTCCTGGT CGGGCCGTCA
CGCTCGTTCC TGCGCTACAT CGACCAGGTG CTGCCGTCGC TCGGCGAGAC GGGTGTGGTC
TCGACGACGC TGGGCGACCT CATCCCGGGG ATCACCGCGA CGGCGGTCGA CGAGGGCGAG
GCCGCGGAGA TCAAGGGGCG CCTGCTGTGG GCGGACGTCG TCCGCCGCGC GGTCCGGGCC
CGCGAACGGG TGCCGGAGCG CGAGGTGCGG TTCCGTCTGG ACGGCCACTC CCTGGTGATC
CGCCCGCGCG ACGTGCGCGA CGCCATCGCG CGTGCCCGCC GCACCCACAA GCCGCACAAC
GAGGCCAGGA CCGGGTTCGT GCGCGACATG CTGGCCCGCC TCGCCGAGCA GTACCAGCGC
GCGGACGGGG GCACGCTGAC GCCCGAGGAC CGCGCCGTCG TGCTGGAGGA CCTGCGCTCC
CTGCGCGAGG TGCGCGTGGC GCTCAACCTC GCCTGGTTCC CGATCTCGCC GAAGAAGCTG
GTCGACGACC TGCTCTCGCG CCCCCACCGC CTCGCCGAGG CCGCGCCCGA GCTCACCGCC
GCCGAGCGTG CCGCCGTGCT GCGCGCCCCG TGGGCGCCCT GGACCGAGTC CGACGTACCG
CTGCTCGACG AGGCCGCCGA GCTGCTGGGC GAGGACGACG CCGTCGCCCG CGCCGAGCAG
CAGTCGCGTG CCGCCGAGCG GGCCGAGGCG CTGGCGCACG CGCGGTCGGT GATCGCGTCG
GGCGCCGCAG CCGGCGCGAT GATCCCGGTC GACGCCGAGA CCCTCGCCGA GCGCTTCGCC
ACGACCGGGC CACGCCTGAC GACGGCGGAG CGTGCCGCCG CAGACCGTGC CTGGACGTAC
GGTCACGTCG TCGTCGACGA GGCGCAGGAG CTCTCGCCGA TGGCGTGGCG CATGCTCGCA
CGCCGGGTGC CGACCCGGTC GATGACCATC GTCGGGGACG TCGCCCAGAC CTCGTCGCGC
GCGGGCGCGC GGTCGTGGTC GGCTGCGCTG ACCCCCGTGC TGGGCTCCGG GTGGCGGCTC
GAGGAGCTCA CCGTCTCCTA CCGCACGCCG GCCGAGGTGG CCGACGCCGC GCAGCGCATC
GCCAAGGCGG CCGGGCTGCC CGCGTCACCG CTCACCGCCG CACGCGAGGT GCCGGGGGCG
ATCGTCGACG TGCCGGTGGC GGACGCCGCC GAGGTCGCGG CCCGCGTGGC CGAGCGGGCC
GTCGCCCTGG CCACCGAGCT CGTCGGACCC GACGGCGCGG GCCGCATCGC CGTCGTCGCC
TCCGATCCCG CCGTCGCCGC GCTGCGGCAG GCGGTCGGCG CCGCCCTGCC CGCGGCTCTC
GGCGAGGCCG AGGCCGCACG CCTGGCCGAC CAGCGCCGGG AGGACGAGCA GGTCACCGTG
CTGGCCCCGC GCGACGTCAA GGGCCTGGAG TACGACGCCG TCGTGCTCGT CGAGCCCACC
GACATCGCCC ACGGCCCTGG CGGCTGGTCC GACCTGTACG TGGCGATGAC CCGCCCGACG
CAGCGCCTCG TCGTGGTGCG CGCGACCCCC CTGCCGGACG GTTTCACCGG CTGA
|
|---|
| Protein sequence | MTGRQDELAH EQAVVDELYA RLDELRSRAR GRLRAVRREG PSGSPQNRSE RDAFATLYED
RAAQLDAVED RLAFGRLDLD EGTVRYVGRI GLTDDEQRSM LTDWRAPAAE AFYRATALRP
AGVRRRRHLV TAGRKVTGVE DELLDLTGAD DGDLDASSLS GEGALLAALA TRRTGRMSDI
VATIQAEQDR IIRSDLAGAL VVQGGPGTGK TAVALHRAAY LLYAHRRTLE KAGVLLVGPS
RSFLRYIDQV LPSLGETGVV STTLGDLIPG ITATAVDEGE AAEIKGRLLW ADVVRRAVRA
RERVPEREVR FRLDGHSLVI RPRDVRDAIA RARRTHKPHN EARTGFVRDM LARLAEQYQR
ADGGTLTPED RAVVLEDLRS LREVRVALNL AWFPISPKKL VDDLLSRPHR LAEAAPELTA
AERAAVLRAP WAPWTESDVP LLDEAAELLG EDDAVARAEQ QSRAAERAEA LAHARSVIAS
GAAAGAMIPV DAETLAERFA TTGPRLTTAE RAAADRAWTY GHVVVDEAQE LSPMAWRMLA
RRVPTRSMTI VGDVAQTSSR AGARSWSAAL TPVLGSGWRL EELTVSYRTP AEVADAAQRI
AKAAGLPASP LTAAREVPGA IVDVPVADAA EVAARVAERA VALATELVGP DGAGRIAVVA
SDPAVAALRQ AVGAALPAAL GEAEAARLAD QRREDEQVTV LAPRDVKGLE YDAVVLVEPT
DIAHGPGGWS DLYVAMTRPT QRLVVVRATP LPDGFTG
|
|---|
| |