Gene Xcel_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1246 
Symbol 
ID8648764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1355580 
End bp1356428 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID 
Productextracellular solute-binding protein family 3 
Protein accessionYP_003325835 
Protein GI269956046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.177506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAGC ACACCAAGGG GCTTCTCGCC CTGGCGGCCA CCGCCGCCCT CACCCTGTCT 
GCCTGTTCCA GCGGCACCCC GGGCGAGAAC GGCACCACCG GCGACGCCGA AGGCAGCATC
AAGATCGGGG TCAAGTTCGA CCAGCCGGGC CTCGGCTTCC AGGACGGCGC CGACCACACC
GGCTTCGACG TCGACGTCGC CACGTACGTC GCCGAGAAGC TCGGCTACTC GGTCGACCAG
ATCCAGTGGG TCGAGTCCCC GTCCGCGCAG CGCGAGCAGA TGCTGCAGAC CGGGCAGGTC
GACATGATCT TCGCGACGTA CTCGATCACC GACGCGCGCA AGGAGGTCAT CGACTTCGCC
GGGCCGTACT TCGTGGCCGG GCAGGACCTG CTCGTCGCAG CCGACAACAC CGACATCAAC
GGGCCGGAGG ACCTGGCCGG CAAGAACCTG TGCTCGGTCA CCGGGTCGAC CTCGGCCCAG
AAGATCAAGG ACGAGCACGC GGACACGGTC AACCTGCTCG AGCGGCCCGG TTACGCCGAG
TGCGTCACCG CGCTCGTCGC CGCCAACGCC GAGATCGACG CCGTGACCAC CGACGACATC
ATCCTCGCCG GCCTGGCCGC CACCGACGCC AACCGGGGCA AGGTCAAAGT CGTGGGTGCG
CCGTTCTCCA CCGAGCGCTA CGGCGTGGGC CTGCCCAAGG GCTCCGACCG CTGCGAGGCC
ATCAACGAGG CCATCGGCGA GATGATCTCC GACGGCACGT GGGAGGAGCT CGTGGCGAAG
AACACCGAGG GCACCGGCTA CACCGCCAAC GCCGAGACGA ACCCGCCGGA GCAGGACGCC
TGCGCCTGA
 
Protein sequence
MRKHTKGLLA LAATAALTLS ACSSGTPGEN GTTGDAEGSI KIGVKFDQPG LGFQDGADHT 
GFDVDVATYV AEKLGYSVDQ IQWVESPSAQ REQMLQTGQV DMIFATYSIT DARKEVIDFA
GPYFVAGQDL LVAADNTDIN GPEDLAGKNL CSVTGSTSAQ KIKDEHADTV NLLERPGYAE
CVTALVAANA EIDAVTTDDI ILAGLAATDA NRGKVKVVGA PFSTERYGVG LPKGSDRCEA
INEAIGEMIS DGTWEELVAK NTEGTGYTAN AETNPPEQDA CA