Gene Xcel_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1245 
Symbol 
ID8648763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1354759 
End bp1355436 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content67% 
IMG OID 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_003325834 
Protein GI269956045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGAACT TCCTCGACCT CCTCACCGAG TACGACGTCC TCGGGGCGTT CTGGCTGAAC 
ATCCAGCTGA CGTTCTGGGG TGCGCTGGTC GCCCTCGCGA TCGGCACCGT GCTGGCCGTC
ATGCGGATCT CACCGCTGAC GTCCCTGCGG TGGGCGGGCA CCGTGTACGT CGACGTCATC
CGCAACACAC CGCTGACCGT GATCATGACG TTCCTGGTCC TGGCGGTGTG GACGCAGCTC
AACGTCTCGT TGTCCTCCAA CTTCACCCAG AACTTCTTCA ACTTCGCCGT CGTCGGCCTC
GGGGTCTACC ACGCGGCGTT CGTCTGCGAG TCGATCCGCT CCGGCGTCAA CACCGTGCCC
GTGGGGCAGG CCGAGGCAGC CCGCGCGATC GGGCTGCCGT TCCTGGCCGC CGCGCGGATC
GTGGTGCTTC CGCAGGCCTT CCGCGGAGCG ATCGCCCCGC TCGGCAACAC GCTCATCGCA
CTGCTGAAGA ACTCGACGGT GGCCGCGGCG GCCTCCGTCG CCGGTGAGGC AGCGGGCACG
ATGAAGACGA TGGTCGAGTT CCGACCCGAC TACCTGTGGC CGGTCTTCCT GACCTTCGCC
ATCGGGTTCG TCCTCCTGGT CATCCCCATC GGCCTGGTCA CCACCTGGCT GTCCGGCAAG
CTGGCGGTGA AGCGATGA
 
Protein sequence
MSNFLDLLTE YDVLGAFWLN IQLTFWGALV ALAIGTVLAV MRISPLTSLR WAGTVYVDVI 
RNTPLTVIMT FLVLAVWTQL NVSLSSNFTQ NFFNFAVVGL GVYHAAFVCE SIRSGVNTVP
VGQAEAARAI GLPFLAAARI VVLPQAFRGA IAPLGNTLIA LLKNSTVAAA ASVAGEAAGT
MKTMVEFRPD YLWPVFLTFA IGFVLLVIPI GLVTTWLSGK LAVKR