Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1245 |
Symbol | |
ID | 8648763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 1354759 |
End bp | 1355436 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_003325834 |
Protein GI | 269956045 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTCGAACT TCCTCGACCT CCTCACCGAG TACGACGTCC TCGGGGCGTT CTGGCTGAAC ATCCAGCTGA CGTTCTGGGG TGCGCTGGTC GCCCTCGCGA TCGGCACCGT GCTGGCCGTC ATGCGGATCT CACCGCTGAC GTCCCTGCGG TGGGCGGGCA CCGTGTACGT CGACGTCATC CGCAACACAC CGCTGACCGT GATCATGACG TTCCTGGTCC TGGCGGTGTG GACGCAGCTC AACGTCTCGT TGTCCTCCAA CTTCACCCAG AACTTCTTCA ACTTCGCCGT CGTCGGCCTC GGGGTCTACC ACGCGGCGTT CGTCTGCGAG TCGATCCGCT CCGGCGTCAA CACCGTGCCC GTGGGGCAGG CCGAGGCAGC CCGCGCGATC GGGCTGCCGT TCCTGGCCGC CGCGCGGATC GTGGTGCTTC CGCAGGCCTT CCGCGGAGCG ATCGCCCCGC TCGGCAACAC GCTCATCGCA CTGCTGAAGA ACTCGACGGT GGCCGCGGCG GCCTCCGTCG CCGGTGAGGC AGCGGGCACG ATGAAGACGA TGGTCGAGTT CCGACCCGAC TACCTGTGGC CGGTCTTCCT GACCTTCGCC ATCGGGTTCG TCCTCCTGGT CATCCCCATC GGCCTGGTCA CCACCTGGCT GTCCGGCAAG CTGGCGGTGA AGCGATGA
|
Protein sequence | MSNFLDLLTE YDVLGAFWLN IQLTFWGALV ALAIGTVLAV MRISPLTSLR WAGTVYVDVI RNTPLTVIMT FLVLAVWTQL NVSLSSNFTQ NFFNFAVVGL GVYHAAFVCE SIRSGVNTVP VGQAEAARAI GLPFLAAARI VVLPQAFRGA IAPLGNTLIA LLKNSTVAAA ASVAGEAAGT MKTMVEFRPD YLWPVFLTFA IGFVLLVIPI GLVTTWLSGK LAVKR
|
| |